CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SVE_0703500
(
Strongyloides venezuelensis
)
Homeodomain,Paired box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
PF00292 (PAX)
IPR001356
IPR001523
SVE_0703500
T237895_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SVE_0703500.1
Paired box
16
141
GQGRINQLGGMFINGRPLPTHVRLKIIELAKNGVKPCHISRQLKVSHGAVSKILNRFAETGSVSPGQVGGSSKSRIATQCIEKDVASIMEINPDYNANDIRMELIANKICTNENAPSLTSIKKLIK
SVE_0703500.1
Homeodomain
205
261
KRNRTSFTAQQLKALENLFLINTYPDSDEREKLSKITNLSEEKIMTWFSNRRARCRK
Links
Other
Homeodomain,Paired box
family TFs
Other
Strongyloides venezuelensis
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SPAL_0000414100
Strongyloides papillosus
SPAL_0000414100
N
1.000
PTRK_0000745000
Parastrongyloides trichosuri
PTRK_0000745000
N
0.929
SSTP_0000499000
Strongyloides stercoralis
SSTP_0000499000
N
0.863
RSKR_0000772000
Rhabditophanes kr3021
RSKR_0000772000
N
0.775