POU6F1 (Callithrix jacchus)
Homeodomain,POU

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox)
PF00157 (Pou)
IPR001356
IPR000327
ENSCJAG00000017646 T238069_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
POU6F1
M05349_2.00
Homo sapiens
NATTATGNNNNVSATAATN

NATTATSBNNNNCATAATN
SELEX
Yin et al.(2017)
POU6F1_FL_HT-SELEX_1
1.000 1.000
POU6F1
M05350_2.00
Homo sapiens
NTAATKABRTRBNN

NNVYAYVTMATTAN
SELEX
Yin et al.(2017)
POU6F1_FL_HT-SELEX_2
1.000 1.000
POU6F1
M05351_2.00
Homo sapiens
DTAATGAKNN

NNMTCATTAH
SELEX
Yin et al.(2017)
POU6F1_FL_HT-SELEX_3
1.000 1.000
POU6F1
M05352_2.00
Homo sapiens
TATGCNNNGCATA

TATGCNNNGCATA
SELEX
Yin et al.(2017)
POU6F1_FL_HT-SELEX_4
1.000 1.000
POU6F1
M10746_2.00
Homo sapiens
GCATAAWTTAT

ATAAWTTATGC
Transfac
Matys et al.(2006)
V$POU6F1_01
1.000 1.000
POU6F1
M05353_2.00
Homo sapiens
NTAATGAKATGCRN

NYGCATMTCATTAN
SELEX
Yin et al.(2017)
POU6F1_FL_Methyl-HT-SELEX_1
1.000 1.000
POU6F1
M05354_2.00
Homo sapiens
DTAATGAGVD

HBCTCATTAH
SELEX
Yin et al.(2017)
POU6F1_FL_Methyl-HT-SELEX_2
1.000 1.000
POU6F1
M05355_2.00
Homo sapiens
DTATGHTAATKAKN

NMTMATTADCATAH
SELEX
Yin et al.(2017)
POU6F1_FL_Methyl-HT-SELEX_3
1.000 1.000
POU6F1
M05356_2.00
Homo sapiens
TAATKAKNNNTAATKA

TMATTANNNMTMATTA
SELEX
Yin et al.(2017)
POU6F1_FL_Methyl-HT-SELEX_4
1.000 1.000
For this family, TFs with SR scores > 0.993 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSCJAP00000032529 POU 142 213
ENSCJAP00000032529 Homeodomain 235 291
ENSCJAP00000050453 POU 492 563
ENSCJAP00000050453 Homeodomain 585 641

Links

Other Homeodomain,POU family TFs
Other Callithrix jacchus TFs

27 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
POU6F1 Homo sapiens ENSG00000184271 D 1.000
ENSMMUG00000001139 Macaca mulatta ENSMMUG00000001139 I 1.000
POU6F1 Monodelphis domestica ENSMODG00000018676 I 1.000
ENSMPUG00000007990 Mustela putorius furo ENSMPUG00000007990 I 1.000
ENSNLEG00000017777 Nomascus leucogenys ENSNLEG00000017777 I 1.000
POU6F1 Otolemur garnettii ENSOGAG00000007973 I 1.000
ENSPPYG00000004523 Pongo abelii ENSPPYG00000004523 I 1.000
POU6F1 Pan troglodytes ENSPTRG00000004950 I 1.000
Pou6f1 Rattus norvegicus ENSRNOG00000004595 I 1.000
POU6F1 Sorex araneus ENSSARG00000003778 I 1.000
ENSSTOG00000009140 Ictidomys tridecemlineatus ENSSTOG00000009140 I 1.000
POU6F1 Tursiops truncatus ENSTTRG00000013841 I 1.000
ENSMICG00000009560 Microcebus murinus ENSMICG00000009560 I 1.000
ENSMEUG00000001957 Macropus eugenii ENSMEUG00000001957 I 1.000
POU6F1 Loxodonta africana ENSLAFG00000020901 I 1.000
ENSAMEG00000002092 Ailuropoda melanoleuca ENSAMEG00000002092 I 1.000
POU6F1 Canis familiaris ENSCAFG00000007790 I 1.000
ENSCSAG00000005904 Chlorocebus sabaeus ENSCSAG00000005904 I 1.000
POU6F1 Dasypus novemcinctus ENSDNOG00000009291 I 1.000
ENSDORG00000014216 Dipodomys ordii ENSDORG00000014216 I 1.000
POU6F1 Equus caballus ENSECAG00000024200 I 1.000
POU6F1 Erinaceus europaeus ENSEEUG00000014085 I 1.000
ENSETEG00000018248 Echinops telfairi ENSETEG00000018248 I 1.000
POU6F1 Felis catus ENSFCAG00000004408 I 1.000
POU6F1 Gorilla gorilla ENSGGOG00000000227 I 1.000
ENSP00000373895 Macaca fascicularis ENSP00000373895 I 1.000