CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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POU5F1
(
Callithrix jacchus
)
Homeodomain,POU
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
PF00157 (Pou)
IPR001356
IPR000327
ENSCJAG00000019789
T238070_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
acj6
M02241_2.00
Drosophila melanogaster
VTMATTAA
TTAATKAB
PBM
Weirauch et al.(2014)
pTH6053
0.624
0.509
For this family, TFs with SR scores >
0.993
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSCJAP00000036798
POU
44
115
ALQKELEQFAKLLKQKRITLGYTQADVGLTLGVLFGKVFSQTTICRFEALQLSFKNMCKLRPLLQKWVEEAD
ENSCJAP00000036798
Homeodomain
134
190
KRKRTSIENRVRGSLENLFLQCPKPTLQQISHIAQQLGLEKDVVRVWFCNRRQKGKR
ENSCJAP00000036804
POU
141
176
ALQKELEQFAKLLKQKRITLGYTQADVAHPGGSLWK
ENSCJAP00000036806
POU
141
212
ALQKELEQFAKLLKQKRITLGYTQADVGLTLGVLFGKVFSQTTICRFEALQLSFKNMCKLRPLLQKWVEEAD
ENSCJAP00000036806
Homeodomain
231
287
KRKRTSIENRVRGSLENLFLQCPKPTLQQISHIAQQLGLEKDVVRVWFCNRRQKGKR
ENSCJAP00000044285
Homeodomain
17
74
KRKRTSIENRVRGSLENLFLQCPKPTLQQISHIAQQLGLEKDVVHSQVVRVWFCNRRQ
Links
Other
Homeodomain,POU
family TFs
Other
Callithrix jacchus
TFs
25 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSP00000373016
Macaca fascicularis
ENSP00000373016
N
1.000
ENSPANG00000007627
Papio anubis
ENSPANG00000007627
N
1.000
POU5F1
Macaca mulatta
ENSMMUG00000015688
N
1.000
POU5F1
Homo sapiens
ENSG00000204531
D
0.917
ENSPANG00000015262
Papio anubis
ENSPANG00000015262
N
0.806
Myotis_brandtii_POU5F1_10022640
Myotis brandtii
Myotis_brandtii_POU5F1_10022640
N
0.778
ENSOANG00000013329
Ornithorhynchus anatinus
ENSOANG00000013329
I
0.717
POU2F2
Homo sapiens
ENSG00000028277
D
0.641
MESCA009897
Megaselia scalaris
MESCA009897
I
0.635
EFV49290
Trichinella spiralis
EFV49290
I
0.630
BGIBMGA010300
Bombyx mori
BGIBMGA010300
I
0.629
ENSSHAG00000018562
Sarcophilus harrisii
ENSSHAG00000018562
I
0.629
L898_g18190
Steinernema monticolum
L898_g18190
I
0.628
Cmyd_10006628
Chelonia mydas
Cmyd_10006628
I
0.624
L798_02028
Zootermopsis nevadensis
L798_02028
I
0.624
Cflo_05860--XP_394134.2_APIME
Camponotus floridanus
Cflo_05860--XP_394134.2_APIME
I
0.624
AMAM009961
Anopheles maculatus
AMAM009961
I
0.624
acj6
Drosophila melanogaster
FBgn0000028
D
0.624
GPUH_0000951201
Gongylonema pulchrum
GPUH_0000951201
I
0.620
L596_g13343
Steinernema carpocapsae
L596_g13343
I
0.617
ENSCING00000013609
Ciona intestinalis
ENSCING00000013609
I
0.607
ENSCSAVG00000007148
Ciona savignyi
ENSCSAVG00000007148
I
0.607
ECPE_0001547101
Echinostoma caproni
ECPE_0001547101
N
0.604
SBAD_0000673901
Soboliphyme baturini
SBAD_0000673901
I
0.602