pou2f1b (Danio rerio)
Homeodomain,POU

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox)
PF00157 (Pou)
IPR001356
IPR000327
ENSDARG00000007996 T238105_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
POU2F1
M00377_2.00
Homo sapiens
NNTGMAWAWN

NWTWTKCANN
PBM
Berger et al.(2006)
Oct-1
1.000 1.000
Pou2f1
M00803_2.00
Mus musculus
NHATWWNHNN

NNDNWWATDN
PBM
Weirauch et al.(2013)
pTH4325
0.957 0.957
POU2F1
M03308_2.00
Homo sapiens
NDTATGYWAATN

NATTWRCATAHN
SELEX
Jolma et al.(2013)
POU2F1_1
1.000 1.000
POU2F1
M03309_2.00
Homo sapiens
HHTRMATATKCAWN

NWTGMATATKYADD
SELEX
Jolma et al.(2013)
POU2F1_2
1.000 1.000
POU2F1
M09219_2.00
Homo sapiens
RNKBVHATGSAAWYVW

WBRWTTSCATDBVMNY
Misc
Kulakovskiy et al.(2013)
PO2F1_HUMAN.H11MO.0.C
1.000 1.000
POU2F1
M10826_2.00
Homo sapiens
NNVNDTATGCAAATNYNNN

NNNRNATTTGCATAHNBNN
Transfac
Matys et al.(2006)
V$OCT1_01
1.000 1.000
POU2F1
M10827_2.00
Homo sapiens
NNNNTGMATATTCNB

VNGAATATKCANNNN
Transfac
Matys et al.(2006)
V$OCT1_02
1.000 1.000
POU2F1
M10828_2.00
Homo sapiens
NNNRTAATNRNDN

NHNYNATTAYNNN
Transfac
Matys et al.(2006)
V$OCT1_03
1.000 1.000
POU2F1
M10829_2.00
Homo sapiens
DHDNDNNHATGYAWAWNHNWNNW

WNNWNDNWTWTRCATDNNHNHDH
Transfac
Matys et al.(2006)
V$OCT1_04
1.000 1.000
POU2F1
M10830_2.00
Homo sapiens
RRTATGCWAATBMK

MKVATTWGCATAYY
Transfac
Matys et al.(2006)
V$OCT1_05
1.000 1.000
POU2F1
M10831_2.00
Homo sapiens
NRYATSWMAWWNWS

SWNAWTKWSATRYN
Transfac
Matys et al.(2006)
V$OCT1_06
1.000 1.000
POU2F1
M10832_2.00
Homo sapiens
WNTATGBTAATT

AATTAVCATANW
Transfac
Matys et al.(2006)
V$OCT1_07
1.000 1.000
POU2F1
M10833_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$OCT1_B
1.000 1.000
POU2F1
M10834_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$OCT1_Q5_01
1.000 1.000
POU2F1
M10835_2.00
Homo sapiens
VDVHATGCAAAKNMB

VKNMTTTGCATDBHB
Transfac
Matys et al.(2006)
V$OCT1_Q6
1.000 1.000
POU2F1
M10836_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$POU2F1_Q4_01
1.000 1.000
POU2F1
M10837_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$POU2F1_Q4
1.000 1.000
POU2F1
M10838_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$POU2F1_Q6
1.000 1.000
For this family, TFs with SR scores > 0.993 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSDARP00000037034 POU 217 287
ENSDARP00000037034 Homeodomain 319 376
ENSDARP00000113936 POU 238 284
ENSDARP00000116250 POU 171 242
ENSDARP00000116250 Homeodomain 270 326
ENSDARP00000117781 POU 217 287
ENSDARP00000117781 Homeodomain 319 376
ENSDARP00000132682 POU 239 309
ENSDARP00000132682 Homeodomain 341 398
ENSDARP00000140470 POU 217 287
ENSDARP00000140470 Homeodomain 321 378

Links

Other Homeodomain,POU family TFs
Other Danio rerio TFs

46 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSONIG00000014184 Oreochromis niloticus ENSONIG00000014184 I 1.000
ENSPPYG00000000552 Pongo abelii ENSPPYG00000000552 I 1.000
ENSPSIG00000009591 Pelodiscus sinensis ENSPSIG00000009591 I 1.000
POU2F1 Anolis carolinensis ENSACAG00000009565 I 1.000
ENSNLEG00000014790 Nomascus leucogenys ENSNLEG00000014790 I 1.000
POU2F1 Macaca mulatta ENSMMUG00000008155 I 1.000
POU2F1 Monodelphis domestica ENSMODG00000002572 I 1.000
POU2F1 Pan troglodytes ENSPTRG00000001633 I 1.000
POU2F1 Sus scrofa ENSSSCG00000006310 I 1.000
pou2f1 Xenopus tropicalis XB-GENE-853992 I 1.000
pou2f1.S Xenopus laevis XB-GENE-853997 I 1.000
CAA36119 Xenopus laevis CAA36119 I 1.000
ENSP00000356836 Macaca fascicularis ENSP00000356836 I 1.000
ENSP00000356836-D1 Bos grunniens ENSP00000356836-D1 I 1.000
POU2F1 Tupaia belangeri ENSTBEG00000003121 I 1.000
POU2F1 Vicugna pacos ENSVPAG00000000081 I 1.000
POU2F1 Microcebus murinus ENSMICG00000011644 I 1.000
ENSOARG00000012010 Ovis aries ENSOARG00000012010 I 1.000
POU2F1 Callithrix jacchus ENSCJAG00000017095 I 1.000
ENSCSAG00000010919 Chlorocebus sabaeus ENSCSAG00000010919 I 1.000
POU2F1 Meleagris gallopavo ENSMGAG00000014434 I 1.000
POU2F1 Bos taurus ENSBTAG00000024534 I 1.000
ENSAMXG00000002371 Astyanax mexicanus ENSAMXG00000002371 I 1.000
ENSAPLG00000005929 Anas platyrhynchos ENSAPLG00000005929 I 1.000
POU2F1 Dasypus novemcinctus ENSDNOG00000004060 I 1.000
POU2F1 Choloepus hoffmanni ENSCHOG00000004638 I 1.000
ENSLOCG00000009711 Lepisosteus oculatus ENSLOCG00000009711 I 1.000
POU2F1 Loxodonta africana ENSLAFG00000018204 I 1.000
POU2F1 Equus caballus ENSECAG00000009395 I 1.000
POU2F1 Gallus gallus ENSGALG00000015446 I 1.000
POU2F1 Gorilla gorilla ENSGGOG00000016243 I 1.000
POU2F1 Echinops telfairi ENSETEG00000017919 I 1.000
POU2F1 Homo sapiens ENSG00000143190 D 1.000
ENSVPAG00000010276 Vicugna pacos ENSVPAG00000010276 I 0.971
AMAM009299 Anopheles maculatus AMAM009299 I 0.885
GPUH_0002653201 Gongylonema pulchrum GPUH_0002653201 I 0.766
L596_g16531 Steinernema carpocapsae L596_g16531 I 0.766
L893_g4672 Steinernema glaseri L893_g4672 I 0.766
L892_g6561 Steinernema scapterisci L892_g6561 I 0.766
L889_g16900 Steinernema feltiae L889_g16900 I 0.766
L898_g22690 Steinernema monticolum L898_g22690 I 0.766
Brh_R009827 Buceros rhinoceros Brh_R009827 I 0.766
CJA14215 Caenorhabditis japonica CJA14215 I 0.750
POU2F2 Homo sapiens ENSG00000028277 D 0.719
pou5f3 Tetraodon nigroviridis ENSTNIG00000003465 I 0.702