CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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pou2f1b
(
Danio rerio
)
Homeodomain,POU
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
PF00157 (Pou)
IPR001356
IPR000327
ENSDARG00000007996
T238105_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
POU2F1
M00377_2.00
Homo sapiens
NNTGMAWAWN
NWTWTKCANN
PBM
Berger et al.(2006)
Oct-1
1.000
1.000
Pou2f1
M00803_2.00
Mus musculus
NHATWWNHNN
NNDNWWATDN
PBM
Weirauch et al.(2013)
pTH4325
0.957
0.957
POU2F1
M03308_2.00
Homo sapiens
NDTATGYWAATN
NATTWRCATAHN
SELEX
Jolma et al.(2013)
POU2F1_1
1.000
1.000
POU2F1
M03309_2.00
Homo sapiens
HHTRMATATKCAWN
NWTGMATATKYADD
SELEX
Jolma et al.(2013)
POU2F1_2
1.000
1.000
POU2F1
M09219_2.00
Homo sapiens
RNKBVHATGSAAWYVW
WBRWTTSCATDBVMNY
Misc
Kulakovskiy et al.(2013)
PO2F1_HUMAN.H11MO.0.C
1.000
1.000
POU2F1
M10826_2.00
Homo sapiens
NNVNDTATGCAAATNYNNN
NNNRNATTTGCATAHNBNN
Transfac
Matys et al.(2006)
V$OCT1_01
1.000
1.000
POU2F1
M10827_2.00
Homo sapiens
NNNNTGMATATTCNB
VNGAATATKCANNNN
Transfac
Matys et al.(2006)
V$OCT1_02
1.000
1.000
POU2F1
M10828_2.00
Homo sapiens
NNNRTAATNRNDN
NHNYNATTAYNNN
Transfac
Matys et al.(2006)
V$OCT1_03
1.000
1.000
POU2F1
M10829_2.00
Homo sapiens
DHDNDNNHATGYAWAWNHNWNNW
WNNWNDNWTWTRCATDNNHNHDH
Transfac
Matys et al.(2006)
V$OCT1_04
1.000
1.000
POU2F1
M10830_2.00
Homo sapiens
RRTATGCWAATBMK
MKVATTWGCATAYY
Transfac
Matys et al.(2006)
V$OCT1_05
1.000
1.000
POU2F1
M10831_2.00
Homo sapiens
NRYATSWMAWWNWS
SWNAWTKWSATRYN
Transfac
Matys et al.(2006)
V$OCT1_06
1.000
1.000
POU2F1
M10832_2.00
Homo sapiens
WNTATGBTAATT
AATTAVCATANW
Transfac
Matys et al.(2006)
V$OCT1_07
1.000
1.000
POU2F1
M10833_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$OCT1_B
1.000
1.000
POU2F1
M10834_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$OCT1_Q5_01
1.000
1.000
POU2F1
M10835_2.00
Homo sapiens
VDVHATGCAAAKNMB
VKNMTTTGCATDBHB
Transfac
Matys et al.(2006)
V$OCT1_Q6
1.000
1.000
POU2F1
M10836_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$POU2F1_Q4_01
1.000
1.000
POU2F1
M10837_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$POU2F1_Q4
1.000
1.000
POU2F1
M10838_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$POU2F1_Q6
1.000
1.000
For this family, TFs with SR scores >
0.993
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSDARP00000037034
POU
217
287
SDLEELEQFAKTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDA
ENSDARP00000037034
Homeodomain
319
376
RKKRTSIETNIRVALEKSFLEQNQKPTSEEITMIADQLNMEKEVIRVWFCNRRQKEKR
ENSDARP00000113936
POU
238
284
SDLEELEQFAKTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRF
ENSDARP00000116250
POU
171
242
SDLEELEQFAKTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAE
ENSDARP00000116250
Homeodomain
270
326
RKKRTSIETNIRVALEKSFLENQKPTSEEITMIADQLNMEKEVIRVWFCNRRQKEKR
ENSDARP00000117781
POU
217
287
SDLEELEQFAKTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDA
ENSDARP00000117781
Homeodomain
319
376
RKKRTSIETNIRVALEKSFLEQNQKPTSEEITMIADQLNMEKEVIRVWFCNRRQKEKR
ENSDARP00000132682
POU
239
309
SDLEELEQFAKTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDA
ENSDARP00000132682
Homeodomain
341
398
RKKRTSIETNIRVALEKSFLEQNQKPTSEEITMIADQLNMEKEVIRVWFCNRRQKEKR
ENSDARP00000140470
POU
217
287
SDLEELEQFAKTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDA
ENSDARP00000140470
Homeodomain
321
378
RKKRTSIETNIRVALEKSFLEQNQKPTSEEITMIADQLNMEKEVIRVWFCNRRQKEKR
Links
Other
Homeodomain,POU
family TFs
Other
Danio rerio
TFs
46 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy