pou3f3b (Danio rerio)
Homeodomain,POU

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox)
PF00157 (Pou)
IPR001356
IPR000327
ENSDARG00000095896 T238119_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
pou3f3b
M02237_2.00
Danio rerio
NWWATDHNNN

NNNDHATWWN
PBM
Weirauch et al.(2014)
pTH9256
(Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
For this family, TFs with SR scores > 0.993 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M02237_2.00 POU 54 125
M02237_2.00 Homeodomain 144 200

DNA Binding Domains

Protein ID Domain From To Sequence
ENSDARP00000123893 POU 241 312
ENSDARP00000123893 Homeodomain 331 387
ENSDARP00000124688 POU 241 312
ENSDARP00000124688 Homeodomain 331 387

Links

Other Homeodomain,POU family TFs
Other Danio rerio TFs

2 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSAMXG00000009620 Astyanax mexicanus ENSAMXG00000009620 I 1.000