CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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POU6F2
(
Homo sapiens
)
Homeodomain,POU
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
PF00157 (Pou)
IPR001356
IPR000327
ENSG00000106536
T238191_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
POU6F2
M00362_2.00
Homo sapiens
VVTAATTANN
NNTAATTABB
PBM
Barrera et al.(2016)
POU6F2_E639K
(Direct)
(Direct)
POU6F2
M00363_2.00
Homo sapiens
NTAABNNN
NNNVTTAN
PBM
Barrera et al.(2016)
POU6F2_REF
(Direct)
(Direct)
POU6F2
M03303_2.00
Homo sapiens
DVCTMATTAH
DTAATKAGBH
SELEX
Jolma et al.(2013)
POU6F2_1
(Direct)
(Direct)
POU6F2
M03304_2.00
Homo sapiens
HTAATKAGCTMATTAD
HTAATKAGCTMATTAD
SELEX
Jolma et al.(2013)
POU6F2_2
(Direct)
(Direct)
POU6F2
M03305_2.00
Homo sapiens
NNTAATKAGS
SCTMATTANN
SELEX
Jolma et al.(2013)
POU6F2_3
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
For this family, TFs with SR scores >
0.993
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M00362_2.00
POU
19
69
VNLEEIREFAKAFKIRRLSLGLTQTQVGQALSATEGPAYSQSAICRHTILR
M00362_2.00
POU
82
126
TIASSLTAKLNPGLLYPARFEKLDITPKSAQKIKPVLERWMAEAE
M00362_2.00
Homeodomain
148
204
RKRRTSFTPQALEILNAHFEKNTHPSGQEMTKIAEKLNYDREVVRVWFCNKRQALKN
M00363_2.00
POU
19
69
VNLEEIREFAKAFKIRRLSLGLTQTQVGQALSATEGPAYSQSAICRHTILR
M00363_2.00
POU
82
126
TIASSLTAKLNPGLLYPARFEKLDITPKSAQKIKPVLERWMAEAE
M00363_2.00
Homeodomain
148
204
RKRRTSFTPQALEILNAHFEKNTHPSGQEMTEIAEKLNYDREVVRVWFCNKRQALKN
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSP00000384004
POU
479
529
VNLEEIREFAKAFKIRRLSLGLTQTQVGQALSATEGPAYSQSAICRHTILR
ENSP00000384004
POU
542
586
TIASSLTAKLNPGLLYPARFEKLDITPKSAQKIKPVLERWMAEAE
ENSP00000384004
Homeodomain
608
664
RKRRTSFTPQALEILNAHFEKNTHPSGQEMTEIAEKLNYDREVVRVWFCNKRQALKN
ENSP00000430514
POU
479
550
VNLEEIREFAKAFKIRRLSLGLTQTQVGQALSATEGPAYSQSAICRFEKLDITPKSAQKIKPVLERWMAEAE
ENSP00000430514
Homeodomain
572
628
RKRRTSFTPQALEILNAHFEKNTHPSGQEMTEIAEKLNYDREVVRVWFCNKRQALKN
ENSP00000452633
POU
424
474
VNLEEIREFAKAFKIRRLSLGLTQTQVGQALSATEGPAYSQSAICRHTILR
ENSP00000452633
POU
487
531
TIASSLTAKLNPGLLYPARFEKLDITPKSAQKIKPVLERWMAEAE
ENSP00000452633
Homeodomain
553
609
RKRRTSFTPQALEILNAHFEKNTHPSGQEMTEIAEKLNYDREVVRVWFCNKRQALKN
Links
Other
Homeodomain,POU
family TFs
Other
Homo sapiens
TFs
46 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy