POU6F1 (Loxodonta africana)
Homeodomain,POU

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox)
PF00157 (Pou)
IPR001356
IPR000327
ENSLAFG00000020901 T238278_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
POU6F1
M05349_2.00
Homo sapiens
NATTATGNNNNVSATAATN

NATTATSBNNNNCATAATN
SELEX
Yin et al.(2017)
POU6F1_FL_HT-SELEX_1
1.000 1.000
POU6F1
M05350_2.00
Homo sapiens
NTAATKABRTRBNN

NNVYAYVTMATTAN
SELEX
Yin et al.(2017)
POU6F1_FL_HT-SELEX_2
1.000 1.000
POU6F1
M05351_2.00
Homo sapiens
DTAATGAKNN

NNMTCATTAH
SELEX
Yin et al.(2017)
POU6F1_FL_HT-SELEX_3
1.000 1.000
POU6F1
M05352_2.00
Homo sapiens
TATGCNNNGCATA

TATGCNNNGCATA
SELEX
Yin et al.(2017)
POU6F1_FL_HT-SELEX_4
1.000 1.000
POU6F1
M10746_2.00
Homo sapiens
GCATAAWTTAT

ATAAWTTATGC
Transfac
Matys et al.(2006)
V$POU6F1_01
1.000 1.000
POU6F1
M05353_2.00
Homo sapiens
NTAATGAKATGCRN

NYGCATMTCATTAN
SELEX
Yin et al.(2017)
POU6F1_FL_Methyl-HT-SELEX_1
1.000 1.000
POU6F1
M05354_2.00
Homo sapiens
DTAATGAGVD

HBCTCATTAH
SELEX
Yin et al.(2017)
POU6F1_FL_Methyl-HT-SELEX_2
1.000 1.000
POU6F1
M05355_2.00
Homo sapiens
DTATGHTAATKAKN

NMTMATTADCATAH
SELEX
Yin et al.(2017)
POU6F1_FL_Methyl-HT-SELEX_3
1.000 1.000
POU6F1
M05356_2.00
Homo sapiens
TAATKAKNNNTAATKA

TMATTANNNMTMATTA
SELEX
Yin et al.(2017)
POU6F1_FL_Methyl-HT-SELEX_4
1.000 1.000
For this family, TFs with SR scores > 0.993 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSLAFP00000015725 POU 423 494
ENSLAFP00000015725 Homeodomain 516 572
ENSLAFP00000021371 POU 401 472
ENSLAFP00000021371 Homeodomain 494 550

Links

Other Homeodomain,POU family TFs
Other Loxodonta africana TFs

27 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
CapteG175391 Capitella teleta CapteG175391 I 0.000
DAPPUDRAFT_17917 Daphnia pulex DAPPUDRAFT_17917 I 0.000
ENSAMXG00000006160 Astyanax mexicanus ENSAMXG00000006160 I 0.000
ENSAMXG00000013180 Astyanax mexicanus ENSAMXG00000013180 I 0.000
ENSCSAG00000019113 Chlorocebus sabaeus ENSCSAG00000019113 I 0.000
ENSCSAVG00000006732 Ciona savignyi ENSCSAVG00000006732 I 0.000
ENSETEG00000003274 Echinops telfairi ENSETEG00000003274 I 0.000
ENSGMOG00000017063 Gadus morhua ENSGMOG00000017063 I 0.000
ENSGMOG00000020500 Gadus morhua ENSGMOG00000020500 I 0.000
ENSLACG00000001296 Latimeria chalumnae ENSLACG00000001296 I 0.000
ENSLOCG00000012990 Lepisosteus oculatus ENSLOCG00000012990 I 0.000
ENSMEUG00000009518 Macropus eugenii ENSMEUG00000009518 I 0.000
ENSMPUG00000018966 Mustela putorius furo ENSMPUG00000018966 I 0.000
ENSONIG00000006405 Oreochromis niloticus ENSONIG00000006405 I 0.000
ENSONIG00000021432 Oreochromis niloticus ENSONIG00000021432 I 0.000
ENSPFOG00000020363 Poecilia formosa ENSPFOG00000020363 I 0.000
ENSPFOG00000020964 Poecilia formosa ENSPFOG00000020964 I 0.000
ENSPMAG00000004457 Petromyzon marinus ENSPMAG00000004457 I 0.000
ENSPMAG00000004942 Petromyzon marinus ENSPMAG00000004942 I 0.000
ENSSHAG00000012341 Sarcophilus harrisii ENSSHAG00000012341 I 0.000
ENSXMAG00000019810 Xiphophorus maculatus ENSXMAG00000019810 I 0.000
estExt_gwp.C_60230 Branchiostoma floridae estExt_gwp.C_60230 I 0.000
foxq Ciona intestinalis ENSCING00000019322 I 0.000
FOXQ1 Pan troglodytes ENSPTRG00000029883 I 0.000
FOXQ1 Pteropus vampyrus ENSPVAG00000015362 I 0.000
foxq1 Xenopus tropicalis XB-GENE-483842 I 0.000
FOXQ1 Loxodonta africana ENSLAFG00000000082 I 0.000
Foxq1 Mus musculus ENSMUSG00000038415 D 0.000
FOXQ1 Monodelphis domestica ENSMODG00000008316 I 0.000
FOXQ1 Homo sapiens ENSG00000164379 D 0.000
FOXQ1 Erinaceus europaeus ENSEEUG00000009057 I 0.000
foxq1a Danio rerio ENSDARG00000030896 I 0.000
foxq1b Danio rerio ENSDARG00000055395 I 0.000
foxq1b Gasterosteus aculeatus ENSGACG00000005009 I 0.000
foxq1b Takifugu rubripes ENSTRUG00000001789 I 0.000
FOXQ1_RAT Rattus norvegicus FOXQ1_RAT D 0.000
Myotis_brandtii_Foxq1_10020361 Myotis brandtii Myotis_brandtii_Foxq1_10020361 I 0.000
NEMVEDRAFT_v1g201028 Nematostella vectensis NEMVEDRAFT_v1g201028 N 0.000
Sakowv30035367m.g Saccoglossus kowalevskii Sakowv30035367m.g I 0.000
SNAPOd2T00026236001 Oikopleura dioica SNAPOd2T00026236001 I 0.000
SPU_019345 Strongylocentrotus purpuratus SPU_019345 I 0.000
TriadG30486 Trichoplax adhaerens TriadG30486 I 0.000