POU6F1 (Loxodonta africana)
Homeodomain,POU

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox)
PF00157 (Pou)
IPR001356
IPR000327
ENSLAFG00000020901 T238278_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
POU6F1
M05349_2.00
Homo sapiens
NATTATGNNNNVSATAATN

NATTATSBNNNNCATAATN
SELEX
Yin et al.(2017)
POU6F1_FL_HT-SELEX_1
1.000 1.000
POU6F1
M05350_2.00
Homo sapiens
NTAATKABRTRBNN

NNVYAYVTMATTAN
SELEX
Yin et al.(2017)
POU6F1_FL_HT-SELEX_2
1.000 1.000
POU6F1
M05351_2.00
Homo sapiens
DTAATGAKNN

NNMTCATTAH
SELEX
Yin et al.(2017)
POU6F1_FL_HT-SELEX_3
1.000 1.000
POU6F1
M05352_2.00
Homo sapiens
TATGCNNNGCATA

TATGCNNNGCATA
SELEX
Yin et al.(2017)
POU6F1_FL_HT-SELEX_4
1.000 1.000
POU6F1
M10746_2.00
Homo sapiens
GCATAAWTTAT

ATAAWTTATGC
Transfac
Matys et al.(2006)
V$POU6F1_01
1.000 1.000
POU6F1
M05353_2.00
Homo sapiens
NTAATGAKATGCRN

NYGCATMTCATTAN
SELEX
Yin et al.(2017)
POU6F1_FL_Methyl-HT-SELEX_1
1.000 1.000
POU6F1
M05354_2.00
Homo sapiens
DTAATGAGVD

HBCTCATTAH
SELEX
Yin et al.(2017)
POU6F1_FL_Methyl-HT-SELEX_2
1.000 1.000
POU6F1
M05355_2.00
Homo sapiens
DTATGHTAATKAKN

NMTMATTADCATAH
SELEX
Yin et al.(2017)
POU6F1_FL_Methyl-HT-SELEX_3
1.000 1.000
POU6F1
M05356_2.00
Homo sapiens
TAATKAKNNNTAATKA

TMATTANNNMTMATTA
SELEX
Yin et al.(2017)
POU6F1_FL_Methyl-HT-SELEX_4
1.000 1.000
For this family, TFs with SR scores > 0.993 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSLAFP00000015725 POU 423 494
ENSLAFP00000015725 Homeodomain 516 572
ENSLAFP00000021371 POU 401 472
ENSLAFP00000021371 Homeodomain 494 550

Links

Other Homeodomain,POU family TFs
Other Loxodonta africana TFs

Invalid Input OrderBy

27 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action