CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSOPRG00000012834
(
Ochotona princeps
)
Homeodomain,POU
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
PF00157 (Pou)
IPR001356
IPR000327
ENSOPRG00000012834
T238469_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Pou3f1
M00551_2.00
Mus musculus
NNWWATKNN
NNMATWWNN
PBM
Berger et al.(2008)
Pou3f1_3819
1.000
1.000
Pou3f1
M00804_2.00
Mus musculus
NNWAATKHN
NDMATTWNN
PBM
Weirauch et al.(2013)
pTH3819
1.000
1.000
POU3F1
M03315_2.00
Homo sapiens
WTATGYWAATDN
NHATTWRCATAW
SELEX
Jolma et al.(2013)
POU3F1_1
1.000
1.000
POU3F1
M03316_2.00
Homo sapiens
WTGMATAWWDHA
TDHWWTATKCAW
SELEX
Jolma et al.(2013)
POU3F1_2
1.000
1.000
POU3F1
M05483_2.00
Homo sapiens
YAATTRVNNNBYAATTR
YAATTRVNNNBYAATTR
SELEX
Yin et al.(2017)
POU3F1_eDBD_HT-SELEX_1
1.000
1.000
POU3F1
M05484_2.00
Homo sapiens
NTAATBDBVTGCRN
NYGCABVHVATTAN
SELEX
Yin et al.(2017)
POU3F1_eDBD_HT-SELEX_2
1.000
1.000
POU3F1
M05485_2.00
Homo sapiens
NTAATKWABKCDN
NHGMVTWMATTAN
SELEX
Yin et al.(2017)
POU3F1_eDBD_HT-SELEX_3
1.000
1.000
POU3F1
M05486_2.00
Homo sapiens
NHATGYWAATNNN
NNNATTWRCATDN
SELEX
Yin et al.(2017)
POU3F1_eDBD_HT-SELEX_4
1.000
1.000
POU3F1
M09221_2.00
Homo sapiens
VRTKSWWATGCDWD
HWHGCATWWSMAYB
Misc
Kulakovskiy et al.(2013)
PO3F1_HUMAN.H11MO.0.C
1.000
1.000
Pou3f1
M09227_2.00
Mus musculus
BWHATGMAWAWKBMWD
HWKVMWTWTKCATDWV
Misc
Kulakovskiy et al.(2013)
PO3F1_MOUSE.H11MO.0.C
1.000
1.000
POU3F1
M10847_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$POU3F1_Q2
1.000
1.000
POU3F1
M10848_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$POU3F1_Q6
1.000
1.000
POU3F1
M10849_2.00
Homo sapiens
NHABTBWWAWTSMNN
NNKSAWTWAVAVTDN
Transfac
Matys et al.(2006)
V$TST1_01
1.000
1.000
POU3F1
M05487_2.00
Homo sapiens
NTAATGAKATGCRH
DYGCATMTCATTAN
SELEX
Yin et al.(2017)
POU3F1_eDBD_Methyl-HT-SELEX_1
1.000
1.000
POU3F1
M05488_2.00
Homo sapiens
DCGCATAAATTAN
NTAATTTATGCGH
SELEX
Yin et al.(2017)
POU3F1_eDBD_Methyl-HT-SELEX_2
1.000
1.000
POU3F1
M05489_2.00
Homo sapiens
DWATGCGCATWH
DWATGCGCATWH
SELEX
Yin et al.(2017)
POU3F1_eDBD_Methyl-HT-SELEX_3
1.000
1.000
POU3F1
M05490_2.00
Homo sapiens
WTATGCWAATKAG
CTMATTWGCATAW
SELEX
Yin et al.(2017)
POU3F1_eDBD_Methyl-HT-SELEX_4
1.000
1.000
POU3F1
M05491_2.00
Homo sapiens
TMAWKWNNNNNWMATTA
TAATKWNNNNNWMWTKA
SELEX
Yin et al.(2017)
POU3F1_eDBD_Methyl-HT-SELEX_5
1.000
1.000
For this family, TFs with SR scores >
0.993
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOPRP00000011707
POU
45
116
PSSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEETD
ENSOPRP00000011707
Homeodomain
135
191
RKKRTSIEVGVKGALESHFLKCPKPSAHEITGLADSLQLEKEVVRVWFCNRRQKEKR
Links
Other
Homeodomain,POU
family TFs
Other
Ochotona princeps
TFs
17 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy