CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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pou3f2a
(
Takifugu rubripes
)
Homeodomain,POU
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
PF00157 (Pou)
IPR001356
IPR000327
ENSTRUG00000015061
T238677_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
pou3f2a
M02240_2.00
Takifugu rubripes
NHWATNNN
NNNATWDN
PBM
Weirauch et al.(2014)
pTH9365
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
For this family, TFs with SR scores >
0.993
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M02240_2.00
POU
54
125
PTSDELEQFAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEAD
M02240_2.00
Homeodomain
144
200
RKKRTSIEVGVKGALESHFLKCPKPGAAEINSLADSLQLEKEVVRVWFCNRRQKEKR
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTRUP00000038476
POU
227
298
PTSDELEQFAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEAD
ENSTRUP00000038476
Homeodomain
317
373
RKKRTSIEVGVKGALESHFLKCPKPGAAEINSLADSLQLEKEVVRVWFCNRRQKEKR
Links
Other
Homeodomain,POU
family TFs
Other
Takifugu rubripes
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
pou3f2a
Tetraodon nigroviridis
ENSTNIG00000016300
I
1.000
ENSPFOG00000009683
Poecilia formosa
ENSPFOG00000009683
I
1.000
ENSONIG00000020913
Oreochromis niloticus
ENSONIG00000020913
I
1.000