pdm2 (Drosophila melanogaster)
Homeodomain,POU

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox)
PF00157 (Pou)
IPR001356
IPR000327
FBgn0004394 T238714_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
pdm2
M03904_2.00
Drosophila melanogaster
NDTATGCAAATKWVB

VBWMATTTGCATAHN
SELEX
Nitta et al.(2015)
pdm2_1
(Direct) (Direct)
pdm2
M03905_2.00
Drosophila melanogaster
WTATGCAAATKAGNW

WNCTMATTTGCATAW
SELEX
Nitta et al.(2015)
pdm2_2
(Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
For this family, TFs with SR scores > 0.993 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
FBpp0079973 POU 684 755
FBpp0079973 Homeodomain 787 843
FBpp0079974 POU 289 360
FBpp0079974 Homeodomain 392 448
FBpp0309438 POU 684 755
FBpp0309438 Homeodomain 787 843
FBpp0309439 POU 684 755
FBpp0309439 Homeodomain 787 843

Links

Other Homeodomain,POU family TFs
Other Drosophila melanogaster TFs

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5 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action