CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GM14797
(
Drosophila sechellia
)
Homeodomain,POU
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
PF00157 (Pou)
IPR001356
IPR000327
FBgn0169718
T238743_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
vvl
M03907_2.00
Drosophila melanogaster
DWTATGCWAATKAGNH
DNCTMATTWGCATAWH
SELEX
Nitta et al.(2015)
vvl_1
1.000
1.000
vvl
M07542_2.00
Drosophila melanogaster
TKMDTA
TAHKMA
DNaseI footprinting
Mathelier et al.(2014)
MA0254.1
1.000
1.000
vvl
M10857_2.00
Drosophila melanogaster
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
I$CF1A_Q6
1.000
1.000
SGF3_BOMMO
M10858_2.00
Bombyx mori
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
I$SGF3_Q6
1.000
1.000
For this family, TFs with SR scores >
0.993
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0196274
POU
215
286
PTSDDLEAFAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQLSFKNMCKLKPLLQKWLEEAD
FBpp0196274
Homeodomain
305
361
RKKRTSIEVSVKGALEQHFHKQPKPSAQEITSLADSLQLEKEVVRVWFCNRRQKEKR
Links
Other
Homeodomain,POU
family TFs
Other
Drosophila sechellia
TFs
21 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy