ceh-18 (Caenorhabditis elegans)
Homeodomain,POU

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox)
PF00157 (Pou) 		IPR001356
IPR000327 		WBGene00000441 T238866_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ceh-18
M00681_2.00		 Caenorhabditis elegans
TGCATAWT
AWTATGCA		 PBM
Narasimhan et al.(2015)
pTH9885		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Pou2f1
M00803_2.00 		Mus musculus
NHATWWNHNN
NNDNWWATDN		 PBM
Weirauch et al.(2013)
pTH4325 		0.736 0.736
For this family, TFs with SR scores > 0.993 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M00681_2.00 POU 54 125
M00681_2.00 Homeodomain 183 239

DNA Binding Domains

Protein ID Domain From To Sequence
ZC64.3a POU 293 364
ZC64.3a Homeodomain 422 478
ZC64.3b POU 291 362
ZC64.3b Homeodomain 420 476
ZC64.3c POU 306 377

Links

Other Homeodomain,POU family TFs
Other Caenorhabditis elegans TFs

21 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GPUH_0002653201 Gongylonema pulchrum GPUH_0002653201 I 0.903
L596_g16531 Steinernema carpocapsae L596_g16531 I 0.847
L889_g16900 Steinernema feltiae L889_g16900 I 0.847
L892_g6561 Steinernema scapterisci L892_g6561 I 0.847
L893_g4672 Steinernema glaseri L893_g4672 I 0.847
L898_g22690 Steinernema monticolum L898_g22690 I 0.847
ANCDUO_25218 Ancylostoma duodenale ANCDUO_25218 N 0.778
AMAM009299 Anopheles maculatus AMAM009299 I 0.769
CGOC_0000363501 Cylicostephanus goldi CGOC_0000363501 N 0.764
ENSTSYG00000009143 Tarsius syrichta ENSTSYG00000009143 I 0.764
POU2F2 Pteropus vampyrus ENSPVAG00000010621 I 0.764
ENSPPYG00000003972 Pongo abelii ENSPPYG00000003972 I 0.764
ENSSARG00000008273 Sorex araneus ENSSARG00000008273 I 0.761
POU2F2 Homo sapiens ENSG00000028277 D 0.761
snap_masked-nMf.1.1.scaf03688-processed-gene-0.4 Meloidogyne floridensis snap_masked-nMf.1.1.scaf03688-processed-gene-0.4 N 0.750
ENSGMOG00000000005 Gadus morhua ENSGMOG00000000005 I 0.750
ENSORLG00000014257 Oryzias latipes ENSORLG00000014257 I 0.750
ENSDNOG00000046180 Dasypus novemcinctus ENSDNOG00000046180 I 0.750
POU2F3 Pan troglodytes ENSPTRG00000004391 I 0.750
maker-nMf.1.1.scaf02834-augustus-gene-0.10 Meloidogyne floridensis maker-nMf.1.1.scaf02834-augustus-gene-0.10 I 0.708