CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Cmyd_10011817
(
Chelonia mydas
)
Homeodomain,POU
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
PF00157 (Pou)
IPR001356
IPR000327
Cmyd_10011817
T238919_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
D2GWY1_AILME
M02236_2.00
Ailuropoda melanoleuca
NNNATTANN
NNTAATNNN
PBM
Weirauch et al.(2014)
pTH9216
1.000
1.000
POU3F3
M03319_2.00
Homo sapiens
WWTATGYWAATDW
WHATTWRCATAWW
SELEX
Jolma et al.(2013)
POU3F3_1
1.000
1.000
POU3F3
M03320_2.00
Homo sapiens
WTGMATAAWTWW
WWAWTTATKCAW
SELEX
Jolma et al.(2013)
POU3F3_2
1.000
1.000
POU3F3
M03321_2.00
Homo sapiens
WWDMWTAWKHAW
WTDMWTAWKHWW
SELEX
Jolma et al.(2013)
POU3F3_3
1.000
1.000
POU3F3
M10850_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$BRN1_Q6
1.000
1.000
For this family, TFs with SR scores >
0.993
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cmyd_10011817
POU
60
131
PTSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEAD
Cmyd_10011817
Homeodomain
150
206
RKKRTSIEVSVKGALESHFLKCPKPSAQEITNLADSLQLEKEVVRVWFCNRRQKEKR
Links
Other
Homeodomain,POU
family TFs
Other
Chelonia mydas
TFs
21 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
POU3F3
Sus scrofa
ENSSSCG00000022096
I
1.000
ENSSHAG00000017944
Sarcophilus harrisii
ENSSHAG00000017944
I
1.000
Pou3f3
Rattus norvegicus
ENSRNOG00000038909
I
1.000
POU3F3
Pteropus vampyrus
ENSPVAG00000000940
I
1.000
Alligator_sinensis_CCG010902.1
Alligator sinensis
Alligator_sinensis_CCG010902.1
I
1.000
ENSBTAP00000010443-D1
Bos grunniens
ENSBTAP00000010443-D1
I
1.000
XP_002941201
Xenopus tropicalis
XP_002941201
I
1.000
Pvit_02609
Pogona vitticeps
Pvit_02609
I
1.000
Ogr09825
Ophisaurus gracilis
Ogr09825
I
1.000
ENSOGAG00000028714
Otolemur garnettii
ENSOGAG00000028714
I
1.000
POU3F3
Monodelphis domestica
ENSMODG00000002460
I
1.000
ENSFCAG00000030703
Felis catus
ENSFCAG00000030703
I
1.000
ENSCSAG00000019429
Chlorocebus sabaeus
ENSCSAG00000019429
I
1.000
ENSCPOG00000003373
Cavia porcellus
ENSCPOG00000003373
I
1.000
ENSAMEG00000013253
Ailuropoda melanoleuca
ENSAMEG00000013253
I
1.000
POU3F3
Homo sapiens
ENSG00000198914
D
1.000
ENSGGOG00000024561
Gorilla gorilla
ENSGGOG00000024561
I
1.000
ENSMLUG00000004142
Myotis lucifugus
ENSMLUG00000004142
I
1.000
ENSLAFG00000027526
Loxodonta africana
ENSLAFG00000027526
I
1.000
ENSLACG00000014937
Latimeria chalumnae
ENSLACG00000014937
I
1.000
D2GWY1_AILME
Ailuropoda melanoleuca
D2GWY1_AILME
D
1.000