Cmyd_10014303 (Chelonia mydas)
Homeodomain,POU

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox)
PF00157 (Pou)
IPR001356
IPR000327
Cmyd_10014303 T238921_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
POU3F4
M00366_2.00
Homo sapiens
NWATKHN

NDMATWN
PBM
Barrera et al.(2016)
POU3F4_REF
1.000 1.000
Pou3f4
M00550_2.00
Mus musculus
NWWATKHNNN

NNNDMATWWN
PBM
Berger et al.(2008)
Pou3f4_3773
1.000 1.000
POU3F4
M03317_2.00
Homo sapiens
TATGCWAAT

ATTWGCATA
SELEX
Jolma et al.(2013)
POU3F4_1
1.000 1.000
POU3F4
M03318_2.00
Homo sapiens
TGMATAAWTHW

WDAWTTATKCA
SELEX
Jolma et al.(2013)
POU3F4_2
1.000 1.000
POU3F4
M05492_2.00
Homo sapiens
NYWYGCATAATB

VATTATGCRWRN
SELEX
Yin et al.(2017)
POU3F4_eDBD_HT-SELEX_1
1.000 1.000
POU3F4
M05493_2.00
Homo sapiens
NTAATGABATGCRN

NYGCATVTCATTAN
SELEX
Yin et al.(2017)
POU3F4_eDBD_HT-SELEX_2
1.000 1.000
POU3F4
M05494_2.00
Homo sapiens
NYGCATWMATTAN

NTAATKWATGCRN
SELEX
Yin et al.(2017)
POU3F4_eDBD_HT-SELEX_3
1.000 1.000
POU3F4
M05495_2.00
Homo sapiens
DHATGYRCRTMD

HKAYGYRCATDH
SELEX
Yin et al.(2017)
POU3F4_eDBD_HT-SELEX_4
1.000 1.000
POU3F4
M05496_2.00
Homo sapiens
DTATGCWAATKRV

BYMATTWGCATAH
SELEX
Yin et al.(2017)
POU3F4_eDBD_HT-SELEX_5
1.000 1.000
POU3F4
M05497_2.00
Homo sapiens
HTAATGAKATGCGH

DCGCATMTCATTAD
SELEX
Yin et al.(2017)
POU3F4_eDBD_Methyl-HT-SELEX_1
1.000 1.000
POU3F4
M05498_2.00
Homo sapiens
DCGCATAAATTAN

NTAATTTATGCGH
SELEX
Yin et al.(2017)
POU3F4_eDBD_Methyl-HT-SELEX_2
1.000 1.000
POU3F4
M05499_2.00
Homo sapiens
DTATGCGCATAH

DTATGCGCATAH
SELEX
Yin et al.(2017)
POU3F4_eDBD_Methyl-HT-SELEX_3
1.000 1.000
POU3F4
M05500_2.00
Homo sapiens
WTATGCWAATKAG

CTMATTWGCATAW
SELEX
Yin et al.(2017)
POU3F4_eDBD_Methyl-HT-SELEX_4
1.000 1.000
For this family, TFs with SR scores > 0.993 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cmyd_10014303 POU 189 260
Cmyd_10014303 Homeodomain 279 335

Links

Other Homeodomain,POU family TFs
Other Chelonia mydas TFs

39 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSPPYG00000020510 Pongo abelii ENSPPYG00000020510 I 1.000
ENSPSIG00000000094 Pelodiscus sinensis ENSPSIG00000000094 I 1.000
POU3F4 Pan troglodytes ENSPTRG00000040705 I 1.000
ENSPANG00000019402 Papio anubis ENSPANG00000019402 I 1.000
POU3F4 Otolemur garnettii ENSOGAG00000002820 I 1.000
ENSOANG00000002241 Ornithorhynchus anatinus ENSOANG00000002241 I 1.000
ENSOARG00000006191 Ovis aries ENSOARG00000006191 I 1.000
POU3F4 Oryctolagus cuniculus ENSOCUG00000010927 I 1.000
POU3F4 Pteropus vampyrus ENSPVAG00000001305 I 1.000
Pou3f4 Rattus norvegicus ENSRNOG00000002784 I 1.000
ENSP00000362296 Macaca fascicularis ENSP00000362296 I 1.000
Myotis_brandtii_POU3F4_10020378 Myotis brandtii Myotis_brandtii_POU3F4_10020378 I 1.000
Pvit_02954 Pogona vitticeps Pvit_02954 I 1.000
ENSP00000362296-D1 Bos grunniens ENSP00000362296-D1 I 1.000
Alligator_sinensis_CCG017363.1 Alligator sinensis Alligator_sinensis_CCG017363.1 I 1.000
POU3F4 Sus scrofa ENSSSCG00000012454 I 1.000
ENSSTOG00000026467 Ictidomys tridecemlineatus ENSSTOG00000026467 I 1.000
POU3F4 Vicugna pacos ENSVPAG00000010779 I 1.000
Pou3f4 Mus musculus ENSMUSG00000056854 D 1.000
ENSMPUG00000020194 Mustela putorius furo ENSMPUG00000020194 I 1.000
POU3F4 Cavia porcellus ENSCPOG00000003372 I 1.000
ENSCSAG00000000074 Chlorocebus sabaeus ENSCSAG00000000074 I 1.000
POU3F4 Dasypus novemcinctus ENSDNOG00000004912 I 1.000
POU3F4 Callithrix jacchus ENSCJAG00000002526 I 1.000
POU3F4 Choloepus hoffmanni ENSCHOG00000002799 I 1.000
ENSAMXG00000026471 Astyanax mexicanus ENSAMXG00000026471 I 1.000
POU3F4 Bos taurus ENSBTAG00000015712 I 1.000
POU3F4 Canis familiaris ENSCAFG00000017368 I 1.000
Pou3f4 Dipodomys ordii ENSDORG00000006273 I 1.000
POU3F4 Equus caballus ENSECAG00000002519 I 1.000
POU3F4 Myotis lucifugus ENSMLUG00000004140 I 1.000
POU3F4 Macaca mulatta ENSMMUG00000003112 I 1.000
POU3F4 Monodelphis domestica ENSMODG00000014279 I 1.000
POU3F4 Microcebus murinus ENSMICG00000017301 I 1.000
ENSLOCG00000017491 Lepisosteus oculatus ENSLOCG00000017491 I 1.000
POU3F4 Felis catus ENSFCAG00000011964 I 1.000
POU3F4 Homo sapiens ENSG00000196767 D 1.000
POU3F4 Loxodonta africana ENSLAFG00000015688 I 1.000
ENSAMEG00000019562 Ailuropoda melanoleuca ENSAMEG00000019562 I 1.000