|
ENSP00000395926-D1
(Bos grunniens)
Homeodomain,POU
|
TF Information |
Pfam ID |
Interpro ID |
Gene ID |
CIS-BP ID |
Sequence source |
PF00046 (Homeobox)
PF00157 (Pou)
|
IPR001356
IPR000327
|
ENSP00000395926-D1 |
T238943_2.00 |
GigaDB (2015-Oct-22) |
NCBI Gene Info:This gene encodes a tumor suppressor protein containing transcriptional activation, DNA binding, and oligomerization domains. The encoded protein responds to diverse cellular stresses to regulate expression of target genes, thereby inducing cell cycle arrest, apoptosis, senescence, DNA repair, or changes in metabolism. Mutations in this gene are associated with a variety of human cancers, including hereditary cancers such as Li-Fraumeni syndrome. Alternative splicing of this gene and the use of alternate promoters result in multiple transcript variants and isoforms. Additional isoforms have also been shown to result from the use of alternate translation initiation codons from identical transcript variants (PMIDs: 12032546, 20937277). [provided by RefSeq, Dec 2016] |
Directly determined binding motifs |
Name/Motif ID |
Species |
Forward |
Reverse |
Type/Study/Study ID |
SR Score |
DBD Identity |
No direct experiments |
|
|
|
|
|
Motifs from related TFs |
Name/Motif ID |
Species |
Forward |
Reverse |
Type/Study/Study ID |
SR Score |
DBD Identity |
POU6F2
M00363_2.00 |
Homo sapiens |
 NTAABNNN |
 NNNVTTAN |
PBM
Barrera et al.(2016)
POU6F2_REF
|
1.000
|
1.000
|
POU6F2
M03303_2.00 |
Homo sapiens |
 DVCTMATTAH |
 DTAATKAGBH |
SELEX
Jolma et al.(2013)
POU6F2_1
|
1.000
|
1.000
|
POU6F2
M03304_2.00 |
Homo sapiens |
 HTAATKAGCTMATTAD |
 HTAATKAGCTMATTAD |
SELEX
Jolma et al.(2013)
POU6F2_2
|
1.000
|
1.000
|
POU6F2
M03305_2.00 |
Homo sapiens |
 NNTAATKAGS |
 SCTMATTANN |
SELEX
Jolma et al.(2013)
POU6F2_3
|
1.000
|
1.000
|
For this family, TFs with SR scores > 0.993 will likely have a similar motif |