estExt_fgenesh2_pg.C_80253 (Branchiostoma floridae)
Homeodomain,POU

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox)
PF00157 (Pou)
IPR001356
IPR000327
estExt_fgenesh2_pg.C_80253 T239005_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
estExt_fgenesh2_pg.C_80253
M02245_2.00
Branchiostoma floridae
NNNNDHATNN

NNATDHNNNN
PBM
Weirauch et al.(2014)
pTH9245
(Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
For this family, TFs with SR scores > 0.993 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M02245_2.00 POU 54 125
M02245_2.00 Homeodomain 148 204

DNA Binding Domains

Protein ID Domain From To Sequence
estExt_fgenesh2_pg.C_80253 POU 376 447
estExt_fgenesh2_pg.C_80253 Homeodomain 470 526

Links

Other Homeodomain,POU family TFs
Other Branchiostoma floridae TFs

0 Related TFs

">No related TF found