CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pg.scaffold_206000066
(
Branchiostoma floridae
)
Homeodomain,POU
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
PF00157 (Pou)
IPR001356
IPR000327
fgenesh2_pg.scaffold_206000066
T239007_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_206000066
POU
410
481
INLEEIKEFARQFKIRRLSLGLTQTQVGQALSATEGPAYSQSAICRFEKLDITPKSAQKIKPVLERWMAEAE
fgenesh2_pg.scaffold_206000066
Homeodomain
503
559
RKRRTSFTPQALEVLNAHFEKNTHPSGAEMTALAEKLNYDREVIRVWFCNKRQALKN
Links
Other
Homeodomain,POU
family TFs
Other
Branchiostoma floridae
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
fgenesh2_pg.scaffold_189000013
Branchiostoma floridae
fgenesh2_pg.scaffold_189000013
N
1.000