pou6f2 (Xenopus tropicalis)
Homeodomain,POU

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox)
PF00157 (Pou) 		IPR001356
IPR000327 		XB-GENE-853682 T239077_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
POU6F2
M00363_2.00 		Homo sapiens
NTAABNNN
NNNVTTAN		 PBM
Barrera et al.(2016)
POU6F2_REF 		1.000 1.000
POU6F2
M03303_2.00 		Homo sapiens
DVCTMATTAH
DTAATKAGBH		 SELEX
Jolma et al.(2013)
POU6F2_1 		1.000 1.000
POU6F2
M03304_2.00 		Homo sapiens
HTAATKAGCTMATTAD
HTAATKAGCTMATTAD		 SELEX
Jolma et al.(2013)
POU6F2_2 		1.000 1.000
POU6F2
M03305_2.00 		Homo sapiens
NNTAATKAGS
SCTMATTANN		 SELEX
Jolma et al.(2013)
POU6F2_3 		1.000 1.000
For this family, TFs with SR scores > 0.993 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
XP_002937033 POU 470 520
XP_002937033 POU 533 577
XP_002937033 Homeodomain 599 655
XP_002937034 POU 470 541
XP_002937034 Homeodomain 563 619

Links

Other Homeodomain,POU family TFs
Other Xenopus tropicalis TFs

Invalid Input OrderBy

45 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action