pou2f1.S (Xenopus laevis)
Homeodomain,POU

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox)
PF00157 (Pou)
IPR001356
IPR000327
XB-GENE-853997 T239079_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
POU2F1
M00377_2.00
Homo sapiens
NNTGMAWAWN

NWTWTKCANN
PBM
Berger et al.(2006)
Oct-1
1.000 1.000
POU2F1
M03308_2.00
Homo sapiens
NDTATGYWAATN

NATTWRCATAHN
SELEX
Jolma et al.(2013)
POU2F1_1
1.000 1.000
POU2F1
M03309_2.00
Homo sapiens
HHTRMATATKCAWN

NWTGMATATKYADD
SELEX
Jolma et al.(2013)
POU2F1_2
1.000 1.000
POU2F1
M09219_2.00
Homo sapiens
RNKBVHATGSAAWYVW

WBRWTTSCATDBVMNY
Misc
Kulakovskiy et al.(2013)
PO2F1_HUMAN.H11MO.0.C
1.000 1.000
POU2F1
M10826_2.00
Homo sapiens
NNVNDTATGCAAATNYNNN

NNNRNATTTGCATAHNBNN
Transfac
Matys et al.(2006)
V$OCT1_01
1.000 1.000
POU2F1
M10827_2.00
Homo sapiens
NNNNTGMATATTCNB

VNGAATATKCANNNN
Transfac
Matys et al.(2006)
V$OCT1_02
1.000 1.000
POU2F1
M10828_2.00
Homo sapiens
NNNRTAATNRNDN

NHNYNATTAYNNN
Transfac
Matys et al.(2006)
V$OCT1_03
1.000 1.000
POU2F1
M10829_2.00
Homo sapiens
DHDNDNNHATGYAWAWNHNWNNW

WNNWNDNWTWTRCATDNNHNHDH
Transfac
Matys et al.(2006)
V$OCT1_04
1.000 1.000
POU2F1
M10830_2.00
Homo sapiens
RRTATGCWAATBMK

MKVATTWGCATAYY
Transfac
Matys et al.(2006)
V$OCT1_05
1.000 1.000
POU2F1
M10831_2.00
Homo sapiens
NRYATSWMAWWNWS

SWNAWTKWSATRYN
Transfac
Matys et al.(2006)
V$OCT1_06
1.000 1.000
POU2F1
M10832_2.00
Homo sapiens
WNTATGBTAATT

AATTAVCATANW
Transfac
Matys et al.(2006)
V$OCT1_07
1.000 1.000
POU2F1
M10833_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$OCT1_B
1.000 1.000
POU2F1
M10834_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$OCT1_Q5_01
1.000 1.000
POU2F1
M10835_2.00
Homo sapiens
VDVHATGCAAAKNMB

VKNMTTTGCATDBHB
Transfac
Matys et al.(2006)
V$OCT1_Q6
1.000 1.000
POU2F1
M10836_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$POU2F1_Q4_01
1.000 1.000
POU2F1
M10837_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$POU2F1_Q4
1.000 1.000
POU2F1
M10838_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$POU2F1_Q6
1.000 1.000
For this family, TFs with SR scores > 0.993 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CAA35051 POU 297 367
CAA35051 Homeodomain 398 454
CAA38493 POU 1 49
CAA38493 Homeodomain 77 114
CAA38497 POU 1 48
CAA38497 Homeodomain 79 116
CAA40454 POU 297 368
CAA40454 Homeodomain 396 452

Links

Other Homeodomain,POU family TFs
Other Xenopus laevis TFs

Invalid Input OrderBy

34 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action