CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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XP_002941201
(
Xenopus tropicalis
)
Homeodomain,POU
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
PF00157 (Pou)
IPR001356
IPR000327
XP_002941201
T239095_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
D2GWY1_AILME
M02236_2.00
Ailuropoda melanoleuca
NNNATTANN
NNTAATNNN
PBM
Weirauch et al.(2014)
pTH9216
1.000
1.000
POU3F3
M03319_2.00
Homo sapiens
WWTATGYWAATDW
WHATTWRCATAWW
SELEX
Jolma et al.(2013)
POU3F3_1
1.000
1.000
POU3F3
M03320_2.00
Homo sapiens
WTGMATAAWTWW
WWAWTTATKCAW
SELEX
Jolma et al.(2013)
POU3F3_2
1.000
1.000
POU3F3
M03321_2.00
Homo sapiens
WWDMWTAWKHAW
WTDMWTAWKHWW
SELEX
Jolma et al.(2013)
POU3F3_3
1.000
1.000
POU3F3
M10850_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$BRN1_Q6
1.000
1.000
For this family, TFs with SR scores >
0.993
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
XP_002941201
POU
265
336
PTSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEAD
XP_002941201
Homeodomain
355
411
RKKRTSIEVSVKGALESHFLKCPKPSAQEITNLADSLQLEKEVVRVWFCNRRQKEKR
Links
Other
Homeodomain,POU
family TFs
Other
Xenopus tropicalis
TFs
21 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy