CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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L893_g4672
(
Steinernema glaseri
)
Homeodomain,POU
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
PF00157 (Pou)
IPR001356
IPR000327
L893_g4672
T239299_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Pou2f1
M00803_2.00
Mus musculus
NHATWWNHNN
NNDNWWATDN
PBM
Weirauch et al.(2013)
pTH4325
0.736
0.736
For this family, TFs with SR scores >
0.993
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
L893_g4672.t1
POU
65
136
SDLEELENFAQLFKKQRIKFGFTQGDVGVALGRRYGTDFSQTTISRFEALNLSYKNMCKLRPLLTEWLEDAT
L893_g4672.t1
Homeodomain
488
530
RRKRTNLDISQRTALDAYFQINSRPDHERMSELADALELDRDV
L893_g4672.t2
POU
65
136
SDLEELENFAQLFKKQRIKFGFTQGDVGVALGRRYGTDFSQTTISRFEALNLSYKNMCKLRPLLTEWLEDAT
Links
Other
Homeodomain,POU
family TFs
Other
Steinernema glaseri
TFs
26 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy