CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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AMAG_01384
(
Allomyces macrogynus
)
HSF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00447 (HSF_DNA-bind)
IPR000232
AMAG_01384
T239452_2.00
Broad (2016-May-1)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
HSFA4A
M06947_2.00
Arabidopsis thaliana
NNNRGAABBTTCTAGAANN
NNTTCTAGAAVVTTCYNNN
Dap-seq
OMalley et al.(2016)
HSF21_col_a
0.322
0.484
For this family, TFs with SR scores >
0.318
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AMAG_01384T0
HSF
6
107
AFTPSLVSDPATDHVIYWTPSGTSFIVRNVAEFENLLPRYYKHRQFSSFIRQLNTYQFRKINRNPRGARGNLALDGPTEFEFAHEQFLRGRMDLLDNIKRKS
AMAG_01384T1
HSF
44
147
FVQKLYALVSDPATDHVIYWTPSGTSFIVRNVAEFENLLPRYYKHRQFSSFIRQLNTYQFRKINRNPRGARGNLALDGPTEFEFAHEQFLRGRMDLLDNIKRKS
Links
Other
HSF
family TFs
Other
Allomyces macrogynus
TFs
209 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy