CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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AMAG_11988
(
Allomyces macrogynus
)
HSF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00447 (HSF_DNA-bind)
IPR000232
AMAG_11988
T239463_2.00
Broad (2016-May-1)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
hsf-1
M02249_2.00
Neurospora crassa
NNNTTCBDNN
NNHVGAANNN
PBM
Weirauch et al.(2014)
pTH8857
0.342
0.448
ANIA_08035
M02247_2.00
Aspergillus nidulans
NNNNTTCYRN
NYRGAANNNN
PBM
Weirauch et al.(2014)
pTH8231
0.332
0.438
For this family, TFs with SR scores >
0.318
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AMAG_11988T0
HSF
8
171
FISKLYAILQDKSIVHLICWTPNGDGFRVLSPTEFARQVLPACFKHNNISSFVRQLNMYGFSKVSDQSFALAALEATKHAASSSLASSLSSSSPSTSPTVAAGSLATEAGGAAGGDEQSTAAPAAAATVEQKGPAVPYEQPWEFRHPYFQRDKVHLLPLIKRKT
Links
Other
HSF
family TFs
Other
Allomyces macrogynus
TFs
152 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy