AMSG_01638 (Thecamonas trahens)
HSF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00447 (HSF_DNA-bind) IPR000232 AMSG_01638 T239465_2.00 Broad (2016-May-1)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
HSFB2A
M00869_2.00
Arabidopsis thaliana
NNNNNTTCB

VGAANNNNN
PBM
Franco-Zorrilla et al.(2014)
HSFB2A
0.326 0.489
HSFB2A
M06952_2.00
Arabidopsis thaliana
GAANNTTCYAGA

TCTRGAANNTTC
Dap-seq
OMalley et al.(2016)
HSF6_col_a
0.326 0.489
HSFB2B
M06945_2.00
Arabidopsis thaliana
RGAANNTTCTAGAA

TTCTAGAANNTTCY
Dap-seq
OMalley et al.(2016)
HSF7_col_a
0.323 0.523
HSFB2B
M06946_2.00
Arabidopsis thaliana
RGAANNTTCTAGAA

TTCTAGAANNTTCY
Dap-seq
OMalley et al.(2016)
HSF7_colamp_a
0.323 0.523
HSFA4A
M06947_2.00
Arabidopsis thaliana
NNNRGAABBTTCTAGAANN

NNTTCTAGAAVVTTCYNNN
Dap-seq
OMalley et al.(2016)
HSF21_col_a
0.322 0.477
For this family, TFs with SR scores > 0.318 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AMSG_01638T0 HSF 37 128

Links

Other HSF family TFs
Other Thecamonas trahens TFs

Invalid Input OrderBy

278 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action