CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
AMSG_04341
(
Thecamonas trahens
)
HSF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00447 (HSF_DNA-bind)
IPR000232
AMSG_04341
T239469_2.00
Broad (2016-May-1)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
HSF4
M03325_2.00
Homo sapiens
GAANNTTCBVGAA
TTCBVGAANNTTC
SELEX
Jolma et al.(2013)
HSF4_1
0.348
0.534
HSF4
M05509_2.00
Homo sapiens
VGAABVTTCKVGAAN
NTTCBMGAABVTTCB
SELEX
Yin et al.(2017)
HSF4_eDBD_HT-SELEX
0.348
0.534
HSF4
M10862_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HSF4_Q3
0.348
0.534
HSF4
M05510_2.00
Homo sapiens
RGAABVWDCYRGAWN
NWTCYRGHWBVTTCY
SELEX
Yin et al.(2017)
HSF4_eDBD_Methyl-HT-SELEX
0.348
0.534
For this family, TFs with SR scores >
0.318
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AMSG_04341T0
HSF
64
155
FIAKTYAMVSDSVCDHIITWLPEGTSFIVVDADGLTDSVLGTFFKHSNFQSFIRQLNMYGFRKVGAPSHWEFYHDGFRRGRTSLLRYIKRRR
Links
Other
HSF
family TFs
Other
Thecamonas trahens
TFs
47 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AMSG_02004
Thecamonas trahens
AMSG_02004
I
0.353
HSF4
Oryctolagus cuniculus
ENSOCUG00000010001
I
0.348
ENSOARG00000002740
Ovis aries
ENSOARG00000002740
I
0.348
ENSNLEG00000004338
Nomascus leucogenys
ENSNLEG00000004338
I
0.348
ENSMPUG00000005418
Mustela putorius furo
ENSMPUG00000005418
I
0.348
Hsf4
Mus musculus
ENSMUSG00000033249
I
0.348
ENSPANG00000005017
Papio anubis
ENSPANG00000005017
I
0.348
ENSPPYG00000007441
Pongo abelii
ENSPPYG00000007441
I
0.348
HSF4
Tursiops truncatus
ENSTTRG00000010241
I
0.348
ENSBTAP00000004568-D1
Bos grunniens
ENSBTAP00000004568-D1
I
0.348
ENSSTOG00000027009
Ictidomys tridecemlineatus
ENSSTOG00000027009
I
0.348
HSF4
Sus scrofa
ENSSSCG00000002792
I
0.348
HSF4
Pan troglodytes
ENSPTRG00000034007
I
0.348
HSF4
Pteropus vampyrus
ENSPVAG00000000402
I
0.348
HSF4
Macaca mulatta
ENSMMUG00000005906
I
0.348
HSF4
Otolemur garnettii
ENSOGAG00000001391
I
0.348
Hsf4
Dipodomys ordii
ENSDORG00000015128
I
0.348
ENSCSAG00000003768
Chlorocebus sabaeus
ENSCSAG00000003768
I
0.348
HSF4
Canis familiaris
ENSCAFG00000020379
I
0.348
ENSAMEG00000017238
Ailuropoda melanoleuca
ENSAMEG00000017238
I
0.348
HSF4
Equus caballus
ENSECAG00000016708
I
0.348
HSF4
Bos taurus
ENSBTAG00000003514
I
0.348
HSF4
Homo sapiens
ENSG00000102878
D
0.348
HSF4
Gorilla gorilla
ENSGGOG00000011899
I
0.348
HSF4
Ochotona princeps
ENSOPRG00000015074
I
0.347
HSF4
Dasypus novemcinctus
ENSDNOG00000032363
I
0.346
HSF4
Myotis lucifugus
ENSMLUG00000011083
I
0.346
HSF4
Felis catus
ENSFCAG00000014099
I
0.344
AMSG_03636
Thecamonas trahens
AMSG_03636
I
0.342
HSF4
Loxodonta africana
ENSLAFG00000021984
I
0.342
HSF4
Procavia capensis
ENSPCAG00000013012
I
0.342
HSF4
Cavia porcellus
ENSCPOG00000010834
I
0.341
Hsf4
Rattus norvegicus
ENSRNOG00000015253
I
0.335
estExt_Genewise1.C_510007
Bigelowiella natans
estExt_Genewise1.C_510007
I
0.333
MTR_8g105780
Medicago truncatula
MTR_8g105780
I
0.329
HSF4
Microcebus murinus
ENSMICG00000007714
I
0.329
RSKR_0000052100
Rhabditophanes kr3021
RSKR_0000052100
I
0.328
Cagra.13025s0006
Capsella grandiflora
Cagra.13025s0006
I
0.325
PIIN_01911
Piriformospora indica
PIIN_01911
I
0.321
OPUNC03G31000
Oryza punctata
OPUNC03G31000
I
0.321
OB03G40890
Oryza brachyantha
OB03G40890
I
0.321
OBART03G33860
Oryza barthii
OBART03G33860
I
0.320
OGLUM03G33530
Oryza glumaepatula
OGLUM03G33530
I
0.320
ONIVA03G35150
Oryza nivara
ONIVA03G35150
I
0.320
ORGLA03G0308600
Oryza glaberrima
ORGLA03G0308600
I
0.320
ORUFI03G35260
Oryza rufipogon
ORUFI03G35260
I
0.320
BGIOSGA009826
Oryza indica
BGIOSGA009826
I
0.320