VDBG_03345 (Verticillium albo atrum)
HSF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00447 (HSF_DNA-bind) IPR000232 VDBG_03345 T239565_2.00 Broad (2016-May-1)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
SKN7
M00061_2.00
Saccharomyces cerevisiae
AYGGCCRG

CYGGCCRT
PBM
Badis et al.(2008)
SKN7_2117
0.387 0.583
SKN7
M01555_2.00
Saccharomyces cerevisiae
NBGGCBDNNN

NNNHVGCCVN
PBM
Zhu et al.(2009)
Skn7
0.387 0.583
SKN7
M07490_2.00
Saccharomyces cerevisiae
GGCCRN

NYGGCC
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0381.1
0.387 0.583
SKN7
M08582_2.00
Saccharomyces cerevisiae
GBCBVGSCS

SGSCBVGVC
Misc
DeBoer et al.(2011)
YHR206W_380
0.387 0.583
SKN7
M08583_2.00
Saccharomyces cerevisiae
GGCCRN

NYGGCC
Misc
DeBoer et al.(2011)
YHR206W_583
0.387 0.583
For this family, TFs with SR scores > 0.318 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
VDBG_03345T0 HSF 18 121

Links

Other HSF family TFs
Other Verticillium albo atrum TFs

Invalid Input OrderBy

250 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action