CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
AT4G18870
(
Arabidopsis thaliana
)
HSF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00447 (HSF_DNA-bind)
IPR000232
AT4G18870
T239698_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AT4G18870.1
HSF
14
102
FITTTYDMVDDLSLDSIISWSQSGKSFIIWNPEEFYNNLLQRFCFQRINTFFSFLFSHGFRKIDSGKWEFANDNFVRGQRHLINNIISD
AT4G18870.1
HSF
147
237
FPTKIYEMVDDPSSDAIISWSQSGKSFIIWNPQEFCKDHLRRLFNTLHIHFFFYKLKIFGFKKINPKKWEFANDNFVRGQRHLVEIIISND
Links
Other
HSF
family TFs
Other
Arabidopsis thaliana
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Al_scaffold_0007_2288
Arabidopsis lyrata
Al_scaffold_0007_2288
N
0.515
Carubv10007111m.g
Capsella rubella
Carubv10007111m.g
N
0.473
Cagra.4306s0005
Capsella grandiflora
Cagra.4306s0005
N
0.469
Al_scaffold_0007_2701
Arabidopsis lyrata
Al_scaffold_0007_2701
N
0.362
Bostr.30275s0196
Boechera stricta
Bostr.30275s0196
N
0.351
scaffold_702719.1
Arabidopsis lyrata
scaffold_702719.1
N
0.341
Bra013409
Brassica rapa
Bra013409
N
0.332
Bostr.30275s0364
Boechera stricta
Bostr.30275s0364
N
0.331