Bo4g139200 (Brassica oleracea)
HSF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00447 (HSF_DNA-bind) IPR000232 Bo4g139200 T239794_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HSFA4A
M06947_2.00 		Arabidopsis thaliana
NNNRGAABBTTCTAGAANN
NNTTCTAGAAVVTTCYNNN		 Dap-seq
OMalley et al.(2016)
HSF21_col_a 		0.327 0.345
For this family, TFs with SR scores > 0.318 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo4g139200.1 HSF 10 105

Links

Other HSF family TFs
Other Brassica oleracea TFs

100 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bra025635 Brassica rapa Bra025635 I 0.552
Bra025606 Brassica rapa Bra025606 I 0.538
Bo4g139630 Brassica oleracea Bo4g139630 I 0.534
Bra025608 Brassica rapa Bra025608 I 0.533
Bo4g139270 Brassica oleracea Bo4g139270 N 0.519
Bra025611 Brassica rapa Bra025611 N 0.467
Bo4g139650 Brassica oleracea Bo4g139650 N 0.447
Thhalv10028027m.g Eutrema salsugineum Thhalv10028027m.g I 0.406
Bostr.20129s0193 Boechera stricta Bostr.20129s0193 I 0.399
Cagra.3262s0013 Capsella grandiflora Cagra.3262s0013 I 0.382
Cagra.3262s0014 Capsella grandiflora Cagra.3262s0014 I 0.379
Carubv10006026m.g Capsella rubella Carubv10006026m.g I 0.379
Cagra.3262s0011 Capsella grandiflora Cagra.3262s0011 I 0.378
Carubv10006025m.g Capsella rubella Carubv10006025m.g I 0.378
scaffold_600621.1 Arabidopsis lyrata scaffold_600621.1 I 0.365
scaffold_702446.1 Arabidopsis lyrata scaffold_702446.1 N 0.363
scaffold_702441.1 Arabidopsis lyrata scaffold_702441.1 I 0.361
Bra030021 Brassica rapa Bra030021 I 0.359
Carubv10021131m.g Capsella rubella Carubv10021131m.g I 0.359
Cagra.0096s0075 Capsella grandiflora Cagra.0096s0075 I 0.359
Bra030341 Brassica rapa Bra030341 I 0.358
Thhalv10028026m.g Eutrema salsugineum Thhalv10028026m.g I 0.357
AT1G77570 Arabidopsis thaliana AT1G77570 I 0.352
Bra002882 Brassica rapa Bra002882 I 0.342
Bostr.30275s0431 Boechera stricta Bostr.30275s0431 I 0.341
Bostr.26959s0010 Boechera stricta Bostr.26959s0010 I 0.339
Lus10040911.g Linum usitatissimum Lus10040911.g I 0.338
Cagra.3262s0012 Capsella grandiflora Cagra.3262s0012 I 0.336
Bo7g106320 Brassica oleracea Bo7g106320 I 0.333
Bra012571 Brassica rapa Bra012571 I 0.333
Aquca_020_00446 Aquilegia coerulea Aquca_020_00446 I 0.333
MDP0000126826 Malus domestica MDP0000126826 I 0.333
Solyc02g090820.2 Solanum lycopersicum Solyc02g090820.2 I 0.332
PGSC0003DMG401004023 Solanum tuberosum PGSC0003DMG401004023 I 0.332
Bo3g157380 Brassica oleracea Bo3g157380 I 0.331
Carubv10024599m.g Capsella rubella Carubv10024599m.g I 0.330
cassava14764.m1 Manihot esculenta cassava14764.m1 I 0.329
MTR_5g017470 Medicago truncatula MTR_5g017470 I 0.329
Bra025632 Brassica rapa Bra025632 N 0.329
Gorai.009G032300 Gossypium raimondii Gorai.009G032300 I 0.329
Bo1g020010 Brassica oleracea Bo1g020010 I 0.328
MTR_8g087540 Medicago truncatula MTR_8g087540 I 0.328
gene23802-v1.0-hybrid Fragaria vesca gene23802-v1.0-hybrid I 0.328
AT-HSFA4A Arabidopsis lyrata fgenesh2_kg.7__2405__AT4G18880.1 I 0.327
HSFA4A Arabidopsis thaliana AT4G18880 D 0.327
Bostr.30275s0365 Boechera stricta Bostr.30275s0365 I 0.327
POPTR_0011s06820 Populus trichocarpa POPTR_0011s06820 I 0.327
Bra013358 Brassica rapa Bra013358 I 0.327
Eucgr.E02813 Eucalyptus grandis Eucgr.E02813 I 0.327
Ca_09277 Cicer arietinum Ca_09277 I 0.327
Carubv10004953m.g Capsella rubella Carubv10004953m.g I 0.327
PK02428.1 Cannabis sativa PK02428.1 I 0.327
Cagra.4306s0004 Capsella grandiflora Cagra.4306s0004 I 0.327
evm.TU.supercontig_2.169 Carica papaya evm.TU.supercontig_2.169 I 0.326
Ca_08627 Cicer arietinum Ca_08627 I 0.326
Thhalv10025090m.g Eutrema salsugineum Thhalv10025090m.g I 0.326
Lus10007318.g Linum usitatissimum Lus10007318.g I 0.325
Thhalv10025409m.g Eutrema salsugineum Thhalv10025409m.g I 0.325
cassava7697.valid.m1 Manihot esculenta cassava7697.valid.m1 I 0.325
Gorai.011G036400 Gossypium raimondii Gorai.011G036400 I 0.324
Bra020988 Brassica rapa Bra020988 I 0.324
Lus10005420.g Linum usitatissimum Lus10005420.g I 0.323
MDP0000194672 Malus domestica MDP0000194672 I 0.323
Bra013406 Brassica rapa Bra013406 I 0.323
PK09831.1 Cannabis sativa PK09831.1 I 0.323
AT4G19630 Arabidopsis thaliana AT4G19630 N 0.323
Lus10015237.g Linum usitatissimum Lus10015237.g I 0.323
cassava24811.valid.m1 Manihot esculenta cassava24811.valid.m1 I 0.323
mgf006143m Mimulus guttatus mgf006143m I 0.323
TRIUR3_02308 Triticum urartu TRIUR3_02308 I 0.323
MDP0000239602 Malus domestica MDP0000239602 I 0.322
Eucgr.A01948 Eucalyptus grandis Eucgr.A01948 I 0.322
Pm010169 Prunus mume Pm010169 I 0.322
Ca_00428 Cicer arietinum Ca_00428 I 0.322
MDP0000190783 Malus domestica MDP0000190783 I 0.322
VIT_10s0003g01770 Vitis vinifera VIT_10s0003g01770 I 0.322
Gorai.N013300 Gossypium raimondii Gorai.N013300 I 0.322
POPTR_0004s06090 Populus trichocarpa POPTR_0004s06090 I 0.322
Bra017595 Brassica rapa Bra017595 I 0.322
Gorai.010G240800 Gossypium raimondii Gorai.010G240800 I 0.322
Bo9g062710 Brassica oleracea Bo9g062710 I 0.322
PRUPE_ppa006534mg Prunus persica PRUPE_ppa006534mg I 0.322
Aquca_001_00047 Aquilegia coerulea Aquca_001_00047 I 0.321
VIT_12s0028g01410 Vitis vinifera VIT_12s0028g01410 I 0.321
GLYMA05G29470 Glycine max GLYMA05G29470 I 0.321
GLYMA08G12630 Glycine max GLYMA08G12630 I 0.321
SapurV1A.3823s0010 Salix purpurea SapurV1A.3823s0010 I 0.320
SapurV1A.0151s0340 Salix purpurea SapurV1A.0151s0340 I 0.320
Thhalv10026981m.g Eutrema salsugineum Thhalv10026981m.g N 0.320
Bo4g145450 Brassica oleracea Bo4g145450 I 0.320
chr2.CM0304.780.nc Lotus japonicus chr2.CM0304.780.nc I 0.319
Thhalv10026540m.g Eutrema salsugineum Thhalv10026540m.g I 0.319
MDP0000150429 Malus domestica MDP0000150429 I 0.319
scaffold_601314.1 Arabidopsis lyrata scaffold_601314.1 I 0.319
Pavir.Ba01265 Panicum virgatum Pavir.Ba01265 I 0.319
Lus10029269.g Linum usitatissimum Lus10029269.g I 0.319
TCM_029630 Theobroma cacao TCM_029630 I 0.319
MDP0000260377 Malus domestica MDP0000260377 I 0.319
Lus10006618.g Linum usitatissimum Lus10006618.g I 0.318
GLYMA13G29760 Glycine max GLYMA13G29760 I 0.318