CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bo4g139270
(
Brassica oleracea
)
HSF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00447 (HSF_DNA-bind)
IPR000232
Bo4g139270
T239795_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bo4g139270.1
HSF
13
114
FYVQLYQIVDDCSWDQIISWSKSNTNSFIVWDMKKLRSDILLKSSSVLGKNVTEFIAKLRSHGFRSVAKGPGELEFSHDEFSRGPLMKKKMMVKALSESIER
Links
Other
HSF
family TFs
Other
Brassica oleracea
TFs
49 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bra025635
Brassica rapa
Bra025635
I
0.523
Bra025606
Brassica rapa
Bra025606
I
0.521
Bo4g139200
Brassica oleracea
Bo4g139200
I
0.519
Bo4g139630
Brassica oleracea
Bo4g139630
I
0.518
Bra025608
Brassica rapa
Bra025608
I
0.512
Bra025611
Brassica rapa
Bra025611
N
0.480
Bo4g139650
Brassica oleracea
Bo4g139650
N
0.431
Thhalv10028027m.g
Eutrema salsugineum
Thhalv10028027m.g
I
0.400
Bra025632
Brassica rapa
Bra025632
N
0.396
Bostr.20129s0193
Boechera stricta
Bostr.20129s0193
I
0.381
Cagra.3262s0013
Capsella grandiflora
Cagra.3262s0013
I
0.377
Cagra.3262s0014
Capsella grandiflora
Cagra.3262s0014
I
0.373
Carubv10006026m.g
Capsella rubella
Carubv10006026m.g
I
0.371
Carubv10006025m.g
Capsella rubella
Carubv10006025m.g
I
0.370
Cagra.3262s0011
Capsella grandiflora
Cagra.3262s0011
I
0.370
scaffold_702441.1
Arabidopsis lyrata
scaffold_702441.1
I
0.363
scaffold_702446.1
Arabidopsis lyrata
scaffold_702446.1
N
0.358
Bra030021
Brassica rapa
Bra030021
I
0.353
scaffold_600621.1
Arabidopsis lyrata
scaffold_600621.1
I
0.352
Cagra.3262s0012
Capsella grandiflora
Cagra.3262s0012
I
0.346
Carubv10021131m.g
Capsella rubella
Carubv10021131m.g
I
0.340
Cagra.0096s0075
Capsella grandiflora
Cagra.0096s0075
I
0.340
Bostr.26959s0010
Boechera stricta
Bostr.26959s0010
I
0.337
AT1G77570
Arabidopsis thaliana
AT1G77570
I
0.334
Gorai.009G032300
Gossypium raimondii
Gorai.009G032300
I
0.333
Thhalv10028026m.g
Eutrema salsugineum
Thhalv10028026m.g
I
0.331
Bra002882
Brassica rapa
Bra002882
I
0.329
PGSC0003DMG400014323
Solanum tuberosum
PGSC0003DMG400014323
I
0.327
Bostr.30275s0431
Boechera stricta
Bostr.30275s0431
I
0.326
Ca_09277
Cicer arietinum
Ca_09277
I
0.326
Lus10040911.g
Linum usitatissimum
Lus10040911.g
I
0.325
Solyc03g026020.2
Solanum lycopersicum
Solyc03g026020.2
I
0.324
PGSC0003DMG401004023
Solanum tuberosum
PGSC0003DMG401004023
I
0.324
Bra030341
Brassica rapa
Bra030341
I
0.324
Solyc02g090820.2
Solanum lycopersicum
Solyc02g090820.2
I
0.324
Eucgr.A01948
Eucalyptus grandis
Eucgr.A01948
I
0.322
VIT_12s0028g01410
Vitis vinifera
VIT_12s0028g01410
I
0.322
PK02428.1
Cannabis sativa
PK02428.1
I
0.322
Bra000749
Brassica rapa
Bra000749
I
0.322
MDP0000260377
Malus domestica
MDP0000260377
I
0.321
MDP0000190783
Malus domestica
MDP0000190783
I
0.321
MDP0000150429
Malus domestica
MDP0000150429
I
0.321
Al_scaffold_0003_3814
Arabidopsis lyrata
Al_scaffold_0003_3814
I
0.320
evm.TU.supercontig_2.169
Carica papaya
evm.TU.supercontig_2.169
I
0.320
Thhalv10028744m.g
Eutrema salsugineum
Thhalv10028744m.g
I
0.319
cassava7697.valid.m1
Manihot esculenta
cassava7697.valid.m1
I
0.319
Bo3g045370
Brassica oleracea
Bo3g045370
I
0.319
gene23802-v1.0-hybrid
Fragaria vesca
gene23802-v1.0-hybrid
I
0.319
Pavir.Ba01265
Panicum virgatum
Pavir.Ba01265
I
0.319