Bo4g139630 (Brassica oleracea)
HSF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00447 (HSF_DNA-bind) IPR000232 Bo4g139630 T239796_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HSFA4A
M06947_2.00 		Arabidopsis thaliana
NNNRGAABBTTCTAGAANN
NNTTCTAGAAVVTTCYNNN		 Dap-seq
OMalley et al.(2016)
HSF21_col_a 		0.323 0.379
For this family, TFs with SR scores > 0.318 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo4g139630.1 HSF 13 108

Links

Other HSF family TFs
Other Brassica oleracea TFs

139 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bra025635 Brassica rapa Bra025635 I 0.547
Bra025608 Brassica rapa Bra025608 I 0.545
Bra025606 Brassica rapa Bra025606 I 0.538
Bo4g139200 Brassica oleracea Bo4g139200 I 0.534
Bo4g139270 Brassica oleracea Bo4g139270 N 0.518
Bra025611 Brassica rapa Bra025611 N 0.479
Bo4g139650 Brassica oleracea Bo4g139650 N 0.450
Thhalv10028027m.g Eutrema salsugineum Thhalv10028027m.g I 0.423
Bostr.20129s0193 Boechera stricta Bostr.20129s0193 I 0.399
Cagra.3262s0013 Capsella grandiflora Cagra.3262s0013 I 0.393
Carubv10006026m.g Capsella rubella Carubv10006026m.g I 0.388
Carubv10006025m.g Capsella rubella Carubv10006025m.g I 0.387
Cagra.3262s0011 Capsella grandiflora Cagra.3262s0011 I 0.387
Cagra.3262s0014 Capsella grandiflora Cagra.3262s0014 I 0.386
scaffold_702441.1 Arabidopsis lyrata scaffold_702441.1 I 0.374
scaffold_702446.1 Arabidopsis lyrata scaffold_702446.1 N 0.368
scaffold_600621.1 Arabidopsis lyrata scaffold_600621.1 I 0.366
Bra030021 Brassica rapa Bra030021 I 0.362
Cagra.0096s0075 Capsella grandiflora Cagra.0096s0075 I 0.356
Carubv10021131m.g Capsella rubella Carubv10021131m.g I 0.356
AT1G77570 Arabidopsis thaliana AT1G77570 I 0.356
Bra030341 Brassica rapa Bra030341 I 0.348
Bostr.26959s0010 Boechera stricta Bostr.26959s0010 I 0.348
Thhalv10028026m.g Eutrema salsugineum Thhalv10028026m.g I 0.346
PGSC0003DMG401004023 Solanum tuberosum PGSC0003DMG401004023 I 0.344
Solyc02g090820.2 Solanum lycopersicum Solyc02g090820.2 I 0.344
MTR_5g017470 Medicago truncatula MTR_5g017470 I 0.341
Cagra.3262s0012 Capsella grandiflora Cagra.3262s0012 I 0.341
Bostr.30275s0431 Boechera stricta Bostr.30275s0431 I 0.339
Bra002882 Brassica rapa Bra002882 I 0.338
Ca_09277 Cicer arietinum Ca_09277 I 0.337
PK02428.1 Cannabis sativa PK02428.1 I 0.336
Bra025632 Brassica rapa Bra025632 N 0.333
Lus10040911.g Linum usitatissimum Lus10040911.g I 0.332
Carubv10024599m.g Capsella rubella Carubv10024599m.g I 0.330
Bra012571 Brassica rapa Bra012571 I 0.329
MDP0000126826 Malus domestica MDP0000126826 I 0.329
Bo7g106320 Brassica oleracea Bo7g106320 I 0.329
MDP0000260377 Malus domestica MDP0000260377 I 0.328
chr2.CM0304.780.nc Lotus japonicus chr2.CM0304.780.nc I 0.328
MDP0000150429 Malus domestica MDP0000150429 I 0.328
Pavir.Ba01265 Panicum virgatum Pavir.Ba01265 I 0.328
Pm023788 Prunus mume Pm023788 I 0.328
PRUPE_ppa008441mg Prunus persica PRUPE_ppa008441mg I 0.328
Bo3g157380 Brassica oleracea Bo3g157380 I 0.327
Aquca_020_00446 Aquilegia coerulea Aquca_020_00446 I 0.327
MLOC_75166 Hordeum vulgare MLOC_75166 I 0.326
Bra000749 Brassica rapa Bra000749 I 0.325
cassava14764.m1 Manihot esculenta cassava14764.m1 I 0.325
Ca_02416 Cicer arietinum Ca_02416 I 0.325
HSF4 Vitis vinifera VIT_07s0031g00670 I 0.325
Bra017800 Brassica rapa Bra017800 I 0.325
Bo7g118320 Brassica oleracea Bo7g118320 I 0.325
AT4G19630 Arabidopsis thaliana AT4G19630 N 0.324
Bra013406 Brassica rapa Bra013406 I 0.324
MTR_8g087540 Medicago truncatula MTR_8g087540 I 0.324
F775_19430 Aegilops tauschii F775_19430 I 0.324
Gorai.011G105700 Gossypium raimondii Gorai.011G105700 I 0.324
TRIUR3_31165 Triticum urartu TRIUR3_31165 I 0.324
Bra013358 Brassica rapa Bra013358 I 0.323
AT-HSFA4A Arabidopsis lyrata fgenesh2_kg.7__2405__AT4G18880.1 I 0.323
Carubv10004953m.g Capsella rubella Carubv10004953m.g I 0.323
HSFA4A Arabidopsis thaliana AT4G18880 D 0.323
Bo1g020010 Brassica oleracea Bo1g020010 I 0.323
Cagra.4306s0004 Capsella grandiflora Cagra.4306s0004 I 0.323
gene23802-v1.0-hybrid Fragaria vesca gene23802-v1.0-hybrid I 0.323
evm.TU.supercontig_55.150 Carica papaya evm.TU.supercontig_55.150 I 0.323
Bostr.30275s0365 Boechera stricta Bostr.30275s0365 I 0.323
cassava13765.valid.m1 Manihot esculenta cassava13765.valid.m1 I 0.323
POPTR_0011s06820 Populus trichocarpa POPTR_0011s06820 I 0.323
GLYMA01G39260 Glycine max GLYMA01G39260 I 0.322
Bra020988 Brassica rapa Bra020988 I 0.322
Gorai.009G032300 Gossypium raimondii Gorai.009G032300 I 0.322
Ca_08627 Cicer arietinum Ca_08627 I 0.322
GLYMA11G06010 Glycine max GLYMA11G06010 I 0.322
Lus10019348.g Linum usitatissimum Lus10019348.g I 0.322
OGLUM09G17660 Oryza glumaepatula OGLUM09G17660 I 0.322
HSFB2C Oryza sativa OS09G0526600 I 0.322
HSF4 Populus trichocarpa POPTR_0007s11030 I 0.322
mgf014237m Mimulus guttatus mgf014237m I 0.322
Thhalv10003411m.g Eutrema salsugineum Thhalv10003411m.g I 0.322
evm.TU.supercontig_2.169 Carica papaya evm.TU.supercontig_2.169 I 0.321
Lus10007318.g Linum usitatissimum Lus10007318.g I 0.321
Thhalv10025409m.g Eutrema salsugineum Thhalv10025409m.g I 0.321
GRMZM2G165272 Zea mays GRMZM2G165272 I 0.320
Pavir.J03297 Panicum virgatum Pavir.J03297 I 0.320
GLYMA11G02800 Glycine max GLYMA11G02800 I 0.320
GLYMA01G42640 Glycine max GLYMA01G42640 I 0.320
PK17549.1 Cannabis sativa PK17549.1 I 0.320
Eucgr.I00929 Eucalyptus grandis Eucgr.I00929 I 0.320
Gorai.007G053900 Gossypium raimondii Gorai.007G053900 I 0.320
MDP0000127499 Malus domestica MDP0000127499 I 0.320
Bra011735 Brassica rapa Bra011735 I 0.320
Si030094m.g Setaria italica Si030094m.g I 0.320
Gorai.011G036400 Gossypium raimondii Gorai.011G036400 I 0.320
cassava7697.valid.m1 Manihot esculenta cassava7697.valid.m1 I 0.320
Eucgr.E02813 Eucalyptus grandis Eucgr.E02813 I 0.320
Thhalv10028744m.g Eutrema salsugineum Thhalv10028744m.g I 0.319
Lus10005420.g Linum usitatissimum Lus10005420.g I 0.319
Thhalv10026540m.g Eutrema salsugineum Thhalv10026540m.g I 0.319
Lus10009351.g Linum usitatissimum Lus10009351.g I 0.319
Thhalv10025090m.g Eutrema salsugineum Thhalv10025090m.g I 0.319
Lus10015237.g Linum usitatissimum Lus10015237.g I 0.319
evm.TU.supercontig_74.64 Carica papaya evm.TU.supercontig_74.64 I 0.319
cassava24811.valid.m1 Manihot esculenta cassava24811.valid.m1 I 0.319
ONIVA08G25630 Oryza nivara ONIVA08G25630 I 0.319
OMERI09G12670 Oryza meridionalis OMERI09G12670 I 0.319
OMERI08G17470 Oryza meridionalis OMERI08G17470 I 0.319
ONIVA09G18150 Oryza nivara ONIVA09G18150 I 0.319
OPUNC08G20670 Oryza punctata OPUNC08G20670 I 0.319
ORGLA08G0219000 Oryza glaberrima ORGLA08G0219000 I 0.319
OPUNC09G15460 Oryza punctata OPUNC09G15460 I 0.319
OGLUM08G23900 Oryza glumaepatula OGLUM08G23900 I 0.319
OBART08G22550 Oryza barthii OBART08G22550 I 0.319
GLYMA08G12630 Glycine max GLYMA08G12630 I 0.319
BRADI4G35780 Brachypodium distachyon BRADI4G35780 I 0.319
GLYMA10G38240 Glycine max GLYMA10G38240 I 0.319
GLYMA20G29610 Glycine max GLYMA20G29610 I 0.319
OB08G29340 Oryza brachyantha OB08G29340 I 0.319
LPERR08G19290 Leersia perrieri LPERR08G19290 I 0.319
BGIOSGA026537 Oryza indica BGIOSGA026537 I 0.319
ORUFI08G25100 Oryza rufipogon ORUFI08G25100 I 0.319
Sb02g030490 Sorghum bicolor Sb02g030490 I 0.319
Solyc08g080540.2 Solanum lycopersicum Solyc08g080540.2 I 0.319
Cucsa.107610 Cucumis sativus Cucsa.107610 I 0.319
Cla011664 Citrullus lanatus Cla011664 I 0.319
cassava7014.valid.m1 Manihot esculenta cassava7014.valid.m1 I 0.319
Bo3g045370 Brassica oleracea Bo3g045370 I 0.319
BGIOSGA029403 Oryza indica BGIOSGA029403 I 0.319
ORUFI09G18440 Oryza rufipogon ORUFI09G18440 I 0.319
HSFB2B Oryza sativa OS08G0546800 I 0.319
Aquca_001_00047 Aquilegia coerulea Aquca_001_00047 I 0.318
Bra040968 Brassica rapa Bra040968 I 0.318
TCM_016198 Theobroma cacao TCM_016198 I 0.318
POPTR_0001s08990 Populus trichocarpa POPTR_0001s08990 I 0.318
Lus10008007.g Linum usitatissimum Lus10008007.g I 0.318
Pavir.Fb02392 Panicum virgatum Pavir.Fb02392 I 0.318
Lus10024508.g Linum usitatissimum Lus10024508.g I 0.318
Ca_00428 Cicer arietinum Ca_00428 I 0.318