Bo4g145450 (Brassica oleracea)
HSF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00447 (HSF_DNA-bind) IPR000232 Bo4g145450 T239798_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HSFA4A
M06947_2.00 		Arabidopsis thaliana
NNNRGAABBTTCTAGAANN
NNTTCTAGAAVVTTCYNNN		 Dap-seq
OMalley et al.(2016)
HSF21_col_a 		0.338 0.333
HSFA1E
M06939_2.00 		Arabidopsis thaliana
RGAANNTTCTAGA
TCTAGAANNTTCY		 Dap-seq
OMalley et al.(2016)
HSFA1E_col_a 		0.327 0.333
HSFA1E
M06940_2.00 		Arabidopsis thaliana
RGAASNTTCTAGAAN
NTTCTAGAANSTTCY		 Dap-seq
OMalley et al.(2016)
HSFA1E_colamp_a 		0.327 0.333
For this family, TFs with SR scores > 0.318 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo4g145450.1 HSF 12 126

Links

Other HSF family TFs
Other Brassica oleracea TFs

248 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bra030341 Brassica rapa Bra030341 I 0.449
Solyc09g059520.2 Solanum lycopersicum Solyc09g059520.2 I 0.374
PGSC0003DMG400017484 Solanum tuberosum PGSC0003DMG400017484 I 0.374
GRMZM2G115456 Zea mays GRMZM2G115456 I 0.359
AT1G77570 Arabidopsis thaliana AT1G77570 I 0.354
PGSC0003DMG400004662 Solanum tuberosum PGSC0003DMG400004662 I 0.349
Pavir.Ib04475 Panicum virgatum Pavir.Ib04475 I 0.348
GRMZM2G384339 Zea mays GRMZM2G384339 I 0.348
Sb01g000730 Sorghum bicolor Sb01g000730 I 0.348
Pavir.Ia00087 Panicum virgatum Pavir.Ia00087 I 0.348
BRADI1G01130 Brachypodium distachyon BRADI1G01130 I 0.348
Si035526m.g Setaria italica Si035526m.g I 0.348
OMERI03G38170 Oryza meridionalis OMERI03G38170 I 0.347
OGLUM03G41290 Oryza glumaepatula OGLUM03G41290 I 0.347
Ca_00428 Cicer arietinum Ca_00428 I 0.347
LPERR03G35390 Leersia perrieri LPERR03G35390 I 0.347
ONIVA03G43540 Oryza nivara ONIVA03G43540 I 0.347
OBART03G41440 Oryza barthii OBART03G41440 I 0.347
OPUNC03G38490 Oryza punctata OPUNC03G38490 I 0.347
HSFA1 Oryza sativa OS03G0854500 I 0.347
ORGLA03G0383200 Oryza glaberrima ORGLA03G0383200 I 0.347
Solyc12g098520.1 Solanum lycopersicum Solyc12g098520.1 I 0.346
Bo3g055950 Brassica oleracea Bo3g055950 I 0.346
Gorai.004G257000 Gossypium raimondii Gorai.004G257000 I 0.346
VIT_16s0039g01840 Vitis vinifera VIT_16s0039g01840 I 0.345
MDP0000126826 Malus domestica MDP0000126826 I 0.345
PGSC0003DMG400027036 Solanum tuberosum PGSC0003DMG400027036 I 0.345
SapurV1A.1190s0030 Salix purpurea SapurV1A.1190s0030 I 0.345
cassava14764.m1 Manihot esculenta cassava14764.m1 I 0.345
BGIOSGA004459 Oryza indica BGIOSGA004459 I 0.344
OBART01G30880 Oryza barthii OBART01G30880 I 0.344
evm.TU.supercontig_157.44 Carica papaya evm.TU.supercontig_157.44 I 0.344
OGLUM01G35030 Oryza glumaepatula OGLUM01G35030 I 0.344
ORGLA01G0253200 Oryza glaberrima ORGLA01G0253200 I 0.344
Bra012571 Brassica rapa Bra012571 I 0.344
GLYMA16G13400 Glycine max GLYMA16G13400 I 0.344
Bo7g106320 Brassica oleracea Bo7g106320 I 0.344
ONIVA01G35260 Oryza nivara ONIVA01G35260 I 0.344
HSFA4B Oryza sativa OS01G0749300 I 0.344
OMERI01G28000 Oryza meridionalis OMERI01G28000 I 0.344
Traes_6AS_1537629B3 Triticum aestivum Traes_6AS_1537629B3 I 0.343
Sb04g020050 Sorghum bicolor Sb04g020050 I 0.343
GRMZM2G179802 Zea mays GRMZM2G179802 I 0.343
GLYMA01G01990 Glycine max GLYMA01G01990 I 0.343
evm.TU.supercontig_2.169 Carica papaya evm.TU.supercontig_2.169 I 0.343
MDP0000156337 Malus domestica MDP0000156337 I 0.343
F775_00937 Aegilops tauschii F775_00937 I 0.343
Solyc06g072750.2 Solanum lycopersicum Solyc06g072750.2 I 0.342
Thhalv10025409m.g Eutrema salsugineum Thhalv10025409m.g I 0.341
Eucgr.A01948 Eucalyptus grandis Eucgr.A01948 I 0.340
VIT_12s0028g01410 Vitis vinifera VIT_12s0028g01410 I 0.340
OGLUM02G17550 Oryza glumaepatula OGLUM02G17550 I 0.339
mgf006947m Mimulus guttatus mgf006947m I 0.339
cassava24811.valid.m1 Manihot esculenta cassava24811.valid.m1 I 0.339
mgf013331m Mimulus guttatus mgf013331m I 0.339
HSFA5 Oryza sativa OS02G0496100 I 0.339
ONIVA02G18700 Oryza nivara ONIVA02G18700 I 0.339
OMERI02G17330 Oryza meridionalis OMERI02G17330 I 0.339
ORUFI02G18130 Oryza rufipogon ORUFI02G18130 I 0.339
OB01G39790 Oryza brachyantha OB01G39790 I 0.339
BGIOSGA006438 Oryza indica BGIOSGA006438 I 0.339
LPERR02G13860 Leersia perrieri LPERR02G13860 I 0.339
OPUNC01G15930 Oryza punctata OPUNC01G15930 I 0.338
Cagra.4306s0004 Capsella grandiflora Cagra.4306s0004 I 0.338
Carubv10004953m.g Capsella rubella Carubv10004953m.g I 0.338
HSFA4A Arabidopsis thaliana AT4G18880 D 0.338
Lus10007318.g Linum usitatissimum Lus10007318.g I 0.338
AT-HSFA4A Arabidopsis lyrata fgenesh2_kg.7__2405__AT4G18880.1 I 0.338
MTR_8g087540 Medicago truncatula MTR_8g087540 I 0.338
POPTR_0011s06820 Populus trichocarpa POPTR_0011s06820 I 0.338
Bo1g020010 Brassica oleracea Bo1g020010 I 0.338
Bostr.30275s0365 Boechera stricta Bostr.30275s0365 I 0.338
Bra013358 Brassica rapa Bra013358 I 0.338
OPUNC02G15430 Oryza punctata OPUNC02G15430 I 0.337
Lus10040911.g Linum usitatissimum Lus10040911.g I 0.337
Lus10005420.g Linum usitatissimum Lus10005420.g I 0.337
Eucgr.H02675 Eucalyptus grandis Eucgr.H02675 I 0.337
Lus10015237.g Linum usitatissimum Lus10015237.g I 0.337
Bo3g157380 Brassica oleracea Bo3g157380 I 0.337
AMTR_s00013p00262410 Amborella trichopoda AMTR_s00013p00262410 I 0.336
SapurV1A.3823s0010 Salix purpurea SapurV1A.3823s0010 I 0.336
SapurV1A.0151s0340 Salix purpurea SapurV1A.0151s0340 I 0.336
BRADI3G43710 Brachypodium distachyon BRADI3G43710 I 0.336
Bo5g048950 Brassica oleracea Bo5g048950 I 0.336
Lus10005925.g Linum usitatissimum Lus10005925.g I 0.336
Bra023258 Brassica rapa Bra023258 I 0.336
Cucsa.256700 Cucumis sativus Cucsa.256700 I 0.335
mgf006143m Mimulus guttatus mgf006143m I 0.335
Pm023178 Prunus mume Pm023178 I 0.335
PGSC0003DMG400028414 Solanum tuberosum PGSC0003DMG400028414 I 0.335
Gorai.003G053300 Gossypium raimondii Gorai.003G053300 I 0.335
Cla021715 Citrullus lanatus Cla021715 I 0.335
PRUPE_ppa006514mg Prunus persica PRUPE_ppa006514mg I 0.334
Gorai.011G036400 Gossypium raimondii Gorai.011G036400 I 0.334
Pm005887 Prunus mume Pm005887 I 0.334
TCM_029630 Theobroma cacao TCM_029630 I 0.334
Thhalv10025090m.g Eutrema salsugineum Thhalv10025090m.g I 0.334
Solyc08g005170.2 Solanum lycopersicum Solyc08g005170.2 I 0.334
PGSC0003DMG400017846 Solanum tuberosum PGSC0003DMG400017846 I 0.334
GLYMA05G29470 Glycine max GLYMA05G29470 I 0.334
GLYMA08G12630 Glycine max GLYMA08G12630 I 0.334
ATHSFA1D Arabidopsis lyrata fgenesh2_kg.1__3374__AT1G32330.1 I 0.334
GLYMA09G33920 Glycine max GLYMA09G33920 I 0.333
chr4.CM0046.500.nc Lotus japonicus chr4.CM0046.500.nc I 0.333
PDK_20s1831761g001 Phoenix dactylifera PDK_20s1831761g001 I 0.333
PRUPE_ppa006534mg Prunus persica PRUPE_ppa006534mg I 0.332
Aquca_005_00532 Aquilegia coerulea Aquca_005_00532 I 0.332
Aquca_039_00029 Aquilegia coerulea Aquca_039_00029 I 0.332
Lus10040091.g Linum usitatissimum Lus10040091.g I 0.332
Lus10029269.g Linum usitatissimum Lus10029269.g I 0.332
Gorai.006G224000 Gossypium raimondii Gorai.006G224000 I 0.332
Lus10016634.g Linum usitatissimum Lus10016634.g I 0.332
MTR_2g100680 Medicago truncatula MTR_2g100680 I 0.331
Lus10030956.g Linum usitatissimum Lus10030956.g I 0.331
HSFA1A Arabidopsis thaliana AT4G17750 I 0.331
mgf007059m Mimulus guttatus mgf007059m I 0.331
Bostr.30275s0239 Boechera stricta Bostr.30275s0239 I 0.331
AMTR_s00048p00075850 Amborella trichopoda AMTR_s00048p00075850 I 0.331
cassava44108.valid.m1 Manihot esculenta cassava44108.valid.m1 I 0.331
HSFA1D Arabidopsis thaliana AT1G32330 I 0.331
cassava44107.valid.m1 Manihot esculenta cassava44107.valid.m1 I 0.331
mgf011445m Mimulus guttatus mgf011445m I 0.331
chr6.CM0118.920.nd Lotus japonicus chr6.CM0118.920.nd I 0.331
Eucgr.C03056 Eucalyptus grandis Eucgr.C03056 I 0.330
cassava7697.valid.m1 Manihot esculenta cassava7697.valid.m1 I 0.330
ENSGALG00000004644 Gallus gallus ENSGALG00000004644 I 0.330
evm.TU.supercontig_90.16 Carica papaya evm.TU.supercontig_90.16 I 0.330
Ca_11487 Cicer arietinum Ca_11487 I 0.330
Ciclev10015541m.g Citrus clementina Ciclev10015541m.g I 0.330
Aquca_020_00446 Aquilegia coerulea Aquca_020_00446 I 0.330
orange1.1g016378m.g Citrus sinensis orange1.1g016378m.g I 0.330
PGSC0003DMG400032793 Solanum tuberosum PGSC0003DMG400032793 I 0.330
ORUFI01G34020 Oryza rufipogon ORUFI01G34020 I 0.330
PK05866.1 Cannabis sativa PK05866.1 I 0.330
gene13904-v1.0-hybrid Fragaria vesca gene13904-v1.0-hybrid I 0.330
GLYMA13G29760 Glycine max GLYMA13G29760 I 0.329
Gorai.008G225200 Gossypium raimondii Gorai.008G225200 I 0.329
POPTR_0008s13620 Populus trichocarpa POPTR_0008s13620 I 0.329
Solyc07g040680.2 Solanum lycopersicum Solyc07g040680.2 I 0.329
SapurV1A.0852s0050 Salix purpurea SapurV1A.0852s0050 I 0.329
Thhalv10020648m.g Eutrema salsugineum Thhalv10020648m.g I 0.329
Solyc09g065660.2 Solanum lycopersicum Solyc09g065660.2 I 0.329
Lus10011065.g Linum usitatissimum Lus10011065.g I 0.329
POPTR_0003s09370 Populus trichocarpa POPTR_0003s09370 I 0.329
TCM_016563 Theobroma cacao TCM_016563 I 0.329
Gorai.003G183900 Gossypium raimondii Gorai.003G183900 I 0.329
SapurV1A.0181s0030 Salix purpurea SapurV1A.0181s0030 I 0.328
MTR_6g043060 Medicago truncatula MTR_6g043060 I 0.328
PRUPE_ppa004782mg Prunus persica PRUPE_ppa004782mg I 0.328
Cucsa.321980 Cucumis sativus Cucsa.321980 I 0.328
30054.m000802 Ricinus communis 30054.m000802 I 0.328
Bostr.3359s0126 Boechera stricta Bostr.3359s0126 I 0.328
Lus10000312.g Linum usitatissimum Lus10000312.g I 0.328
Cla008974 Citrullus lanatus Cla008974 I 0.328
Gorai.009G032300 Gossypium raimondii Gorai.009G032300 I 0.328
Gorai.001G012700 Gossypium raimondii Gorai.001G012700 I 0.328
Aquca_001_00047 Aquilegia coerulea Aquca_001_00047 I 0.327
chr1.CM0133.110.nc Lotus japonicus chr1.CM0133.110.nc I 0.327
Cagra.1194s0002 Capsella grandiflora Cagra.1194s0002 I 0.327
ATHSFA1E Arabidopsis lyrata fgenesh2_kg.3__246__AT3G02990.1 I 0.327
Carubv10013628m.g Capsella rubella Carubv10013628m.g I 0.327
HSFA1E Arabidopsis thaliana AT3G02990 D 0.327
PK03562.1 Cannabis sativa PK03562.1 I 0.327
Bostr.19046s0011 Boechera stricta Bostr.19046s0011 I 0.327
cassava24315.valid.m1 Manihot esculenta cassava24315.valid.m1 I 0.327
29629.m001435 Ricinus communis 29629.m001435 I 0.327
MTR_8g083100 Medicago truncatula MTR_8g083100 I 0.327
MTR_2g100670 Medicago truncatula MTR_2g100670 I 0.326
GLYMA11G01190 Glycine max GLYMA11G01190 I 0.326
Lus10022546.g Linum usitatissimum Lus10022546.g I 0.326
TCM_025482 Theobroma cacao TCM_025482 I 0.326
Bra021381 Brassica rapa Bra021381 I 0.326
SapurV1A.0058s0140 Salix purpurea SapurV1A.0058s0140 I 0.326
Bo1g155010 Brassica oleracea Bo1g155010 I 0.326
POPTR_0017s08630 Populus trichocarpa POPTR_0017s08630 I 0.326
SapurV1A.0182s0110 Salix purpurea SapurV1A.0182s0110 I 0.326
POPTR_0001s32810 Populus trichocarpa POPTR_0001s32810 I 0.326
PGSC0003DMG400003160 Solanum tuberosum PGSC0003DMG400003160 I 0.325
Bra001071 Brassica rapa Bra001071 I 0.325
TCM_020222 Theobroma cacao TCM_020222 I 0.325
Lus10006618.g Linum usitatissimum Lus10006618.g I 0.325
orange1.1g010166m.g Citrus sinensis orange1.1g010166m.g I 0.325
Solyc03g097120.2 Solanum lycopersicum Solyc03g097120.2 I 0.325
Aquca_034_00075 Aquilegia coerulea Aquca_034_00075 I 0.325
PK20762.1 Cannabis sativa PK20762.1 I 0.324
GLYMA15G09280 Glycine max GLYMA15G09280 I 0.324
PRUPE_ppa004559mg Prunus persica PRUPE_ppa004559mg I 0.324
Bo1g017810 Brassica oleracea Bo1g017810 I 0.324
PGSC0003DMG400008223 Solanum tuberosum PGSC0003DMG400008223 I 0.324
PGSC0003DMG400014811 Solanum tuberosum PGSC0003DMG400014811 I 0.324
Bra040179 Brassica rapa Bra040179 I 0.324
GSMUA_Achr6G31750_001 Musa acuminata GSMUA_Achr6G31750_001 I 0.324
Pm011227 Prunus mume Pm011227 I 0.324
PGSC0003DMG401027812 Solanum tuberosum PGSC0003DMG401027812 I 0.324
Cagra.4610s0006 Capsella grandiflora Cagra.4610s0006 I 0.324
Carubv10004729m.g Capsella rubella Carubv10004729m.g I 0.324
Ca_08536 Cicer arietinum Ca_08536 I 0.323
TRIUR3_02308 Triticum urartu TRIUR3_02308 I 0.323
PITG_04700 Phytophthora infestans PITG_04700 N 0.323
Gorai.005G027500 Gossypium raimondii Gorai.005G027500 I 0.323
Gorai.012G044200 Gossypium raimondii Gorai.012G044200 I 0.322
Bra032752 Brassica rapa Bra032752 I 0.322
Bo4g128450 Brassica oleracea Bo4g128450 I 0.322
Bostr.9017s0008 Boechera stricta Bostr.9017s0008 I 0.322
GSMUA_Achr4G04500_001 Musa acuminata GSMUA_Achr4G04500_001 I 0.322
Bra032023 Brassica rapa Bra032023 I 0.322
Solyc03g006000.2 Solanum lycopersicum Solyc03g006000.2 I 0.321
MDP0000489886 Malus domestica MDP0000489886 I 0.321
AT-HSFA5 Arabidopsis lyrata fgenesh2_kg.7__2946__AT4G13980.1 I 0.321
LPERR01G26480 Leersia perrieri LPERR01G26480 I 0.321
Si019082m.g Setaria italica Si019082m.g I 0.321
Thhalv10025116m.g Eutrema salsugineum Thhalv10025116m.g I 0.321
PGSC0003DMG401019343 Solanum tuberosum PGSC0003DMG401019343 I 0.321
HSFA5 Arabidopsis thaliana AT4G13980 I 0.321
Eucgr.E02813 Eucalyptus grandis Eucgr.E02813 I 0.321
GSMUA_Achr4G17040_001 Musa acuminata GSMUA_Achr4G17040_001 I 0.321
PGSC0003DMG402019343 Solanum tuberosum PGSC0003DMG402019343 I 0.321
POPTR_0006s24330 Populus trichocarpa POPTR_0006s24330 I 0.320
PGSC0003DMG400017334 Solanum tuberosum PGSC0003DMG400017334 I 0.320
SapurV1A.0086s0550 Salix purpurea SapurV1A.0086s0550 I 0.320
29739.m003565 Ricinus communis 29739.m003565 I 0.320
Bo5g150300 Brassica oleracea Bo5g150300 I 0.320
TRIUR3_08676 Triticum urartu TRIUR3_08676 I 0.320
Bo4g139200 Brassica oleracea Bo4g139200 I 0.320
Solyc08g076590.2 Solanum lycopersicum Solyc08g076590.2 I 0.320
gene23802-v1.0-hybrid Fragaria vesca gene23802-v1.0-hybrid I 0.320
MLOC_74270 Hordeum vulgare MLOC_74270 I 0.320
Solyc07g055710.2 Solanum lycopersicum Solyc07g055710.2 I 0.320
Sb03g034630 Sorghum bicolor Sb03g034630 I 0.319
mgf025463m Mimulus guttatus mgf025463m I 0.319
GLYMA01G44330 Glycine max GLYMA01G44330 I 0.319
cassava35573.valid.m1 Manihot esculenta cassava35573.valid.m1 I 0.319
gene29004-v1.0-hybrid Fragaria vesca gene29004-v1.0-hybrid I 0.319
GRMZM2G118453 Zea mays GRMZM2G118453 I 0.319
TCM_037635 Theobroma cacao TCM_037635 I 0.319
Si001439m.g Setaria italica Si001439m.g I 0.319
Carubv10008952m.g Capsella rubella Carubv10008952m.g I 0.319
Pavir.Eb03132 Panicum virgatum Pavir.Eb03132 I 0.319
Cagra.3957s0014 Capsella grandiflora Cagra.3957s0014 I 0.319
30026.m001484 Ricinus communis 30026.m001484 I 0.319
GSMUA_Achr5G03000_001 Musa acuminata GSMUA_Achr5G03000_001 I 0.319
LPERR07G04400 Leersia perrieri LPERR07G04400 I 0.319
orange1.1g016091m.g Citrus sinensis orange1.1g016091m.g I 0.318
Traes_6DS_C59B6322F Triticum aestivum Traes_6DS_C59B6322F I 0.318
TRIUR3_11025 Triticum urartu TRIUR3_11025 I 0.318
Ciclev10008617m.g Citrus clementina Ciclev10008617m.g I 0.318
OLONG_013342 Oryza longistaminata OLONG_013342 I 0.318
scaffold_201202.1 Arabidopsis lyrata scaffold_201202.1 I 0.318