GLYMA08G05220 (Glycine max)
HSF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00447 (HSF_DNA-bind) IPR000232 GLYMA08G05220 T240694_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
HSFA1E
M06939_2.00
Arabidopsis thaliana
RGAANNTTCTAGA

TCTAGAANNTTCY
Dap-seq
OMalley et al.(2016)
HSFA1E_col_a
0.370 0.632
HSFA1E
M06940_2.00
Arabidopsis thaliana
RGAASNTTCTAGAAN

NTTCTAGAANSTTCY
Dap-seq
OMalley et al.(2016)
HSFA1E_colamp_a
0.370 0.632
HSFA6B
M06941_2.00
Arabidopsis thaliana
RGAASNTTCTAGA

TCTAGAANSTTCY
Dap-seq
OMalley et al.(2016)
HSFA6B_colamp_a
0.353 0.678
HSFA6B
M06942_2.00
Arabidopsis thaliana
RGAABNTTCTRGAAN

NTTCYAGAANVTTCY
Dap-seq
OMalley et al.(2016)
HSFA6B_col
0.353 0.678
HSFA4A
M06947_2.00
Arabidopsis thaliana
NNNRGAABBTTCTAGAANN

NNTTCTAGAAVVTTCYNNN
Dap-seq
OMalley et al.(2016)
HSF21_col_a
0.352 0.644
HSFC1
M00868_2.00
Arabidopsis thaliana
NDTCBNNN

NNNVGAHN
PBM
Franco-Zorrilla et al.(2014)
HSFC1
0.343 0.632
HSFC1
M06943_2.00
Arabidopsis thaliana
GAASNTTCTAG

CTAGAANSTTC
Dap-seq
OMalley et al.(2016)
HSFC1_col_a
0.343 0.632
HSFC1
M06944_2.00
Arabidopsis thaliana
RGAASNTTCTAGAANVW

WBNTTCTAGAANSTTCY
Dap-seq
OMalley et al.(2016)
HSFC1_colamp_a
0.343 0.632
HSFA1B
M06948_2.00
Arabidopsis thaliana
GAANNTTCTAGA

TCTAGAANNTTC
Dap-seq
OMalley et al.(2016)
HSF3_col_a
0.342 0.644
HSFA1B
M06949_2.00
Arabidopsis thaliana
TTCYRG

CYRGAA
Dap-seq
OMalley et al.(2016)
HSF3_colamp_a
0.342 0.644
For this family, TFs with SR scores > 0.318 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA08G05220.4 HSF 17 107
GLYMA08G05220.5 HSF 17 107
GLYMA08G05220.6 HSF 17 107

Links

Other HSF family TFs
Other Glycine max TFs

Invalid Input OrderBy

806 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action