CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
GSPATT00026018001
(
Paramecium tetraurelia
)
HSF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00447 (HSF_DNA-bind)
IPR000232
GSPATT00026018001
T240852_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
HSFA4A
M06947_2.00
Arabidopsis thaliana
NNNRGAABBTTCTAGAANN
NNTTCTAGAAVVTTCYNNN
Dap-seq
OMalley et al.(2016)
HSF21_col_a
0.319
0.461
For this family, TFs with SR scores >
0.318
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CAK93678
HSF
29
121
FLLKTYEIIDNPQNKDIISWNEEGSAFIVKKVNEFSDIILPKSFKHNNFASFVRQLNMYDFHKTRHDNNENEFKHKLFQRSKKHLLSQIKRKT
Links
Other
HSF
family TFs
Other
Paramecium tetraurelia
TFs
240 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
cassava22173.valid.m1
Manihot esculenta
cassava22173.valid.m1
I
0.000
Cla013854
Citrullus lanatus
Cla013854
I
0.000
MDP0000146969
Malus domestica
MDP0000146969
I
0.000
Lus10028713.g
Linum usitatissimum
Lus10028713.g
I
0.000
cassava19069.valid.m1
Manihot esculenta
cassava19069.valid.m1
I
0.000
Gorai.009G260000
Gossypium raimondii
Gorai.009G260000
I
0.000
Gorai.005G076200
Gossypium raimondii
Gorai.005G076200
I
0.000
mg018130m
Mimulus guttatus
mg018130m
I
0.000
evm.TU.supercontig_26.135
Carica papaya
evm.TU.supercontig_26.135
I
0.000
MDP0000169485
Malus domestica
MDP0000169485
I
0.000
VIT_18s0001g01820
Vitis vinifera
VIT_18s0001g01820
I
0.000
TCM_036587
Theobroma cacao
TCM_036587
I
0.000
SapurV1A.0348s0040
Salix purpurea
SapurV1A.0348s0040
I
0.000
SapurV1A.0134s0420
Salix purpurea
SapurV1A.0134s0420
I
0.000
PGSC0003DMG400031149
Solanum tuberosum
PGSC0003DMG400031149
I
0.000
POPTR_0002s06210
Populus trichocarpa
POPTR_0002s06210
I
0.000
POPTR_0005s22180
Populus trichocarpa
POPTR_0005s22180
I
0.000
MDP0000852271
Malus domestica
MDP0000852271
I
0.000
Solyc04g072220.2
Solanum lycopersicum
Solyc04g072220.2
I
0.000
Solyc12g056790.1
Solanum lycopersicum
Solyc12g056790.1
I
0.000
Ciclev10000612m.g
Citrus clementina
Ciclev10000612m.g
I
0.000
Eucgr.F02771
Eucalyptus grandis
Eucgr.F02771
N
0.000
Aquca_017_00010
Aquilegia coerulea
Aquca_017_00010
N
0.000
GLYMA20G31210
Glycine max
GLYMA20G31210
N
0.000
MTR_1g097300
Medicago truncatula
MTR_1g097300
N
0.000
PRUPE_ppa003410mg
Prunus persica
PRUPE_ppa003410mg
N
0.000
Ca_04337
Cicer arietinum
Ca_04337
N
0.000
Cla016588
Citrullus lanatus
Cla016588
N
0.000
Pm022358
Prunus mume
Pm022358
N
0.000
GLYMA10G36360
Glycine max
GLYMA10G36360
N
0.000
Cucsa.364130
Cucumis sativus
Cucsa.364130
N
0.000
LjSGA_007769.1
Lotus japonicus
LjSGA_007769.1
N
0.000