LACBIDRAFT_147701 (Laccaria bicolor)
HSF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00447 (HSF_DNA-bind) IPR000232 LACBIDRAFT_147701 T241012_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HSF4
M03325_2.00 		Homo sapiens
GAANNTTCBVGAA
TTCBVGAANNTTC		 SELEX
Jolma et al.(2013)
HSF4_1 		0.358 0.479
HSF4
M05509_2.00 		Homo sapiens
VGAABVTTCKVGAAN
NTTCBMGAABVTTCB		 SELEX
Yin et al.(2017)
HSF4_eDBD_HT-SELEX 		0.358 0.479
HSF4
M10862_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HSF4_Q3 		0.358 0.479
HSF4
M05510_2.00 		Homo sapiens
RGAABVWDCYRGAWN
NWTCYRGHWBVTTCY		 SELEX
Yin et al.(2017)
HSF4_eDBD_Methyl-HT-SELEX 		0.358 0.479
ANIA_08035
M02247_2.00 		Aspergillus nidulans
NNNNTTCYRN
NYRGAANNNN		 PBM
Weirauch et al.(2014)
pTH8231 		0.336 0.458
HSF1
M00060_2.00 		Saccharomyces cerevisiae
NNNTTCNNN
NNNGAANNN		 PBM
Badis et al.(2008)
HSF1_4530 		0.333 0.438
HSF1
M07489_2.00 		Saccharomyces cerevisiae
HVTTCCAT
ATGGAABD		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0319.1 		0.333 0.438
HSF1
M08577_2.00 		Saccharomyces cerevisiae
TTCTAGAA
TTCTAGAA		 Misc
DeBoer et al.(2011)
YGL073W_1461 		0.333 0.438
HSF1
M08578_2.00 		Saccharomyces cerevisiae
GAANNNNNWRGAA
TTCYWNNNNNTTC		 Misc
DeBoer et al.(2011)
YGL073W_411 		0.333 0.438
HSF1
M08579_2.00 		Saccharomyces cerevisiae
HVTTCCAT
ATGGAABD		 Misc
DeBoer et al.(2011)
YGL073W_476 		0.333 0.438
HSF1
M08580_2.00 		Saccharomyces cerevisiae
RGAABNTTCTRGAA
TTCYAGAANVTTCY		 Misc
DeBoer et al.(2011)
YGL073W_615 		0.333 0.438
HSF1
M10874_2.00 		Saccharomyces cerevisiae
RGAANRGAANRGAAN
NTTCYNTTCYNTTCY		 Transfac
Matys et al.(2006)
F$HSF_02 		0.333 0.438
HSF1
M10875_2.00 		Saccharomyces cerevisiae
RGAANNTTCYNTTCY
RGAANRGAANNTTCY		 Transfac
Matys et al.(2006)
F$HSF_03 		0.333 0.438
HSF1
M10876_2.00 		Saccharomyces cerevisiae
RGAANNTTCYRGAAN
NTTCYRGAANNTTCY		 Transfac
Matys et al.(2006)
F$HSF_04 		0.333 0.438
HSF1
M10877_2.00 		Saccharomyces cerevisiae
NTTCYNTTCYRGAAN
NTTCYRGAANRGAAN		 Transfac
Matys et al.(2006)
F$HSF_05 		0.333 0.438
HSF1
M10878_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$HSF_Q6 		0.333 0.438
HSF1
M03329_2.00 		Homo sapiens
GAANVTTCBVGAA
TTCBVGAABNTTC		 SELEX
Jolma et al.(2013)
HSF1_1 		0.332 0.500
HSF1
M03330_2.00 		Homo sapiens
GAANRTTCBAGAA
TTCTVGAAYNTTC		 SELEX
Jolma et al.(2013)
HSF1_2 		0.332 0.500
HSF1
M05523_2.00 		Homo sapiens
VGAABVTTCBVGAWN
NWTCBVGAABVTTCB		 SELEX
Yin et al.(2017)
HSF1_eDBD_HT-SELEX 		0.332 0.500
HSF1
M05525_2.00 		Homo sapiens
VGAANRTTCKVGAAN
NTTCBMGAAYNTTCB		 SELEX
Yin et al.(2017)
HSF1_FL_HT-SELEX 		0.332 0.500
HSF1
M07977_2.00 		Homo sapiens
GDCSYGGGTTCRADYCCC
GGGRHTYGAACCCRSGHC		 ChIP-seq
Gerstein et al.(2012)
HepG2_HSF1_Stanford 		0.332 0.500
HSF1
M09230_2.00 		Homo sapiens
NRGAANNTTCYRGAA
TTCYRGAANNTTCYN		 Misc
Kulakovskiy et al.(2013)
HSF1_HUMAN.H11MO.0.A 		0.332 0.500
Hsf1
M09232_2.00 		Mus musculus
NRGAANNTTCYRGAA
TTCYRGAANNTTCYN		 Misc
Kulakovskiy et al.(2013)
HSF1_MOUSE.H11MO.0.A 		0.332 0.500
HSF1
M09592_2.00 		Homo sapiens
NNBBCYRGAANNTTCYRGVV
BBCYRGAANNTTCYRGVVNN		 Misc
Heinz et al.(2010)
HepG2-HSF1_GSE31477 		0.332 0.500
Hsf1
M09593_2.00 		Mus musculus
NRGAANNTTCYRGAA
TTCYRGAANNTTCYN		 Misc
Heinz et al.(2010)
Striatum-HSF1_GSE38000 		0.332 0.500
HSF1
M10863_2.00 		Homo sapiens
NGAAHNTTCY
RGAANDTTCN		 Transfac
Matys et al.(2006)
V$HSF1_01 		0.332 0.500
HSF1
M10864_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HSF1_Q5_01 		0.332 0.500
HSF1
M10865_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HSF1_Q5 		0.332 0.500
HSF1
M10866_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HSF1_Q6_01 		0.332 0.500
HSF1
M10867_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HSF1_Q6 		0.332 0.500
HSF1
M10868_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HSF_Q6 		0.332 0.500
HSF1
M05524_2.00 		Homo sapiens
RGAANRTTCYRGAWN
NWTCYRGAAYNTTCY		 SELEX
Yin et al.(2017)
HSF1_eDBD_Methyl-HT-SELEX 		0.332 0.500
HSF1
M05526_2.00 		Homo sapiens
RGAANVTTCYRGAWN
NWTCYRGAABNTTCY		 SELEX
Yin et al.(2017)
HSF1_FL_Methyl-HT-SELEX 		0.332 0.500
hsf2
M02248_2.00 		Danio rerio
NNNWGTTCTATNN
NNATAGAACWNNN		 PBM
Weirauch et al.(2014)
pTH9010 		0.328 0.500
hsf-1
M00682_2.00 		Caenorhabditis elegans
TTCYAGAA
TTCTRGAA		 PBM
Narasimhan et al.(2015)
pTH10796 		0.326 0.427
hsf-1
M02249_2.00 		Neurospora crassa
NNNTTCBDNN
NNHVGAANNN		 PBM
Weirauch et al.(2014)
pTH8857 		0.325 0.458
Hsf2
M09231_2.00 		Mus musculus
VGAABVTTCKVGAN
NTCBMGAABVTTCB		 Misc
Kulakovskiy et al.(2013)
HSF2_MOUSE.H11MO.0.A 		0.323 0.500
For this family, TFs with SR scores > 0.318 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EDR10420 HSF 4 106

Links

Other HSF family TFs
Other Laccaria bicolor TFs

Invalid Input OrderBy

410 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action