CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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NBO_616g0003
(
Nosema bombycis
)
HSF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00447 (HSF_DNA-bind)
IPR000232
NBO_616g0003
T241314_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
HSF1
M00060_2.00
Saccharomyces cerevisiae
NNNTTCNNN
NNNGAANNN
PBM
Badis et al.(2008)
HSF1_4530
0.329
0.371
HSF1
M07489_2.00
Saccharomyces cerevisiae
HVTTCCAT
ATGGAABD
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0319.1
0.329
0.371
HSF1
M08577_2.00
Saccharomyces cerevisiae
TTCTAGAA
TTCTAGAA
Misc
DeBoer et al.(2011)
YGL073W_1461
0.329
0.371
HSF1
M08578_2.00
Saccharomyces cerevisiae
GAANNNNNWRGAA
TTCYWNNNNNTTC
Misc
DeBoer et al.(2011)
YGL073W_411
0.329
0.371
HSF1
M08579_2.00
Saccharomyces cerevisiae
HVTTCCAT
ATGGAABD
Misc
DeBoer et al.(2011)
YGL073W_476
0.329
0.371
HSF1
M08580_2.00
Saccharomyces cerevisiae
RGAABNTTCTRGAA
TTCYAGAANVTTCY
Misc
DeBoer et al.(2011)
YGL073W_615
0.329
0.371
HSF1
M10874_2.00
Saccharomyces cerevisiae
RGAANRGAANRGAAN
NTTCYNTTCYNTTCY
Transfac
Matys et al.(2006)
F$HSF_02
0.329
0.371
HSF1
M10875_2.00
Saccharomyces cerevisiae
RGAANNTTCYNTTCY
RGAANRGAANNTTCY
Transfac
Matys et al.(2006)
F$HSF_03
0.329
0.371
HSF1
M10876_2.00
Saccharomyces cerevisiae
RGAANNTTCYRGAAN
NTTCYRGAANNTTCY
Transfac
Matys et al.(2006)
F$HSF_04
0.329
0.371
HSF1
M10877_2.00
Saccharomyces cerevisiae
NTTCYNTTCYRGAAN
NTTCYRGAANRGAAN
Transfac
Matys et al.(2006)
F$HSF_05
0.329
0.371
HSF1
M10878_2.00
Saccharomyces cerevisiae
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$HSF_Q6
0.329
0.371
For this family, TFs with SR scores >
0.318
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EOB11956
HSF
13
104
FIKRLFIIVSDESIKDISWSEDGKAICIKNKEEFMKNALPFLSKTKEYSAFIRQLNLYGFIKVKGSSLYEEYFHSSFQKGREDLLSQVKHDR
Links
Other
HSF
family TFs
Other
Nosema bombycis
TFs
30 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
NBO_644gi001
Nosema bombycis
NBO_644gi001
I
0.581
AGOS_AFL085C
Ashbya gossypii
AGOS_AFL085C
I
0.341
Cagra.2516s0029
Capsella grandiflora
Cagra.2516s0029
N
0.335
AACERI_AaceriAFL085C
Saccharomycetaceae sp ashbya aceri
AACERI_AaceriAFL085C
I
0.335
CLUG_04646
Candida lusitaniae
CLUG_04646
I
0.332
CLUG_04646
Clavispora lusitaniae
CLUG_04646
I
0.332
8607_YGL073W
Saccharomyces paradoxus
8607_YGL073W
I
0.329
HSF1
Saccharomyces cerevisiae
YGL073W
D
0.329
PGTG_00887
Puccinia graminis
PGTG_00887
I
0.328
SCHCODRAFT_255836
Schizophyllum commune
SCHCODRAFT_255836
I
0.328
Bostr.0556s0470
Boechera stricta
Bostr.0556s0470
I
0.328
SKUD_205711
Saccharomyces kudriavzevii
SKUD_205711
I
0.327
CORT_0G01110
Candida orthopsilosis
CORT_0G01110
I
0.327
7859_YGL073W
Saccharomyces mikatae
7859_YGL073W
I
0.327
Ecym_2208
Eremothecium cymbalariae
Ecym_2208
I
0.327
SU7_1143
Saccharomyces arboricola
SU7_1143
I
0.327
gww1.3.1.288.1
Pichia stipitis
gww1.3.1.288.1
I
0.326
LELG_03593
Lodderomyces elongisporus
LELG_03593
I
0.326
PICST_16323
Scheffersomyces stipitis
PICST_16323
I
0.326
CPAG_04303
Candida parapsilosis
CPAG_04303
I
0.326
DOTSEDRAFT_72541
Dothistroma septosporum
DOTSEDRAFT_72541
I
0.321
GSPATT00018829001
Paramecium tetraurelia
GSPATT00018829001
N
0.321
CaO19.4775
Candida albicans
CaO19.4775
I
0.320
CaO19.12238
Candida albicans
CaO19.12238
I
0.320
CAGL0H03443g
Candida glabrata
CAGL0H03443g
I
0.319
ZBAI_03930
Zygosaccharomyces bailii
ZBAI_03930
I
0.319
TDEL_0E05170
Torulaspora delbrueckii
TDEL_0E05170
I
0.319
ZBAI_09737
Zygosaccharomyces bailii
ZBAI_09737
I
0.319
J056_002394
Wallemia ichthyophaga
J056_002394
I
0.319
G210_5457
Candida maltosa
G210_5457
I
0.318