OBART03G28460 (Oryza barthii)
HSF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00447 (HSF_DNA-bind) IPR000232 OBART03G28460 T241375_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
HSFB2B
M06945_2.00
Arabidopsis thaliana
RGAANNTTCTAGAA

TTCTAGAANNTTCY
Dap-seq
OMalley et al.(2016)
HSF7_col_a
0.337 0.578
HSFB2B
M06946_2.00
Arabidopsis thaliana
RGAANNTTCTAGAA

TTCTAGAANNTTCY
Dap-seq
OMalley et al.(2016)
HSF7_colamp_a
0.337 0.578
HSFB3
M06937_2.00
Arabidopsis thaliana
RRAANMWTCTAGAAV

BTTCTAGAWKNTTYY
Dap-seq
OMalley et al.(2016)
HSFB3_col_a
0.327 0.533
HSFB3
M06938_2.00
Arabidopsis thaliana
AABSTTCTAGAAN

NTTCTAGAASVTT
Dap-seq
OMalley et al.(2016)
HSFB3_colamp_a
0.327 0.533
For this family, TFs with SR scores > 0.318 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OBART03G28460.1 HSF 3 55

Links

Other HSF family TFs
Other Oryza barthii TFs

129 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
F775_19430 Aegilops tauschii F775_19430 I 0.323
AMTR_s00069p00068180 Amborella trichopoda AMTR_s00069p00068180 I 0.340
AMTR_s00132p00118400 Amborella trichopoda AMTR_s00132p00118400 I 0.329
AT-HSFB2B Arabidopsis lyrata scaffold_603575.1 I 0.337
AT-HSFB3 Arabidopsis lyrata fgenesh1_pm.C_scaffold_4001910 I 0.322
HSFB3 Arabidopsis thaliana AT2G41690 D 0.327
HSFB2B Arabidopsis thaliana AT4G11660 D 0.337
Bostr.11568s0011 Boechera stricta Bostr.11568s0011 I 0.322
Bostr.25463s0156 Boechera stricta Bostr.25463s0156 I 0.337
BRADI4G35780 Brachypodium distachyon BRADI4G35780 I 0.342
BRADI3G42130 Brachypodium distachyon BRADI3G42130 I 0.320
Bo3g108110 Brassica oleracea Bo3g108110 I 0.320
Bo3g045370 Brassica oleracea Bo3g045370 I 0.338
Bra010049 Brassica rapa Bra010049 I 0.320
Bra040968 Brassica rapa Bra040968 I 0.340
Bra000235 Brassica rapa Bra000235 I 0.325
PK17549.1 Cannabis sativa PK17549.1 I 0.338
PK19243.1 Cannabis sativa PK19243.1 I 0.329
Cagra.1912s0005 Capsella grandiflora Cagra.1912s0005 I 0.339
Cagra.0914s0008 Capsella grandiflora Cagra.0914s0008 I 0.327
Carubv10001204m.g Capsella rubella Carubv10001204m.g I 0.339
Carubv10023839m.g Capsella rubella Carubv10023839m.g I 0.327
evm.TU.supercontig_74.64 Carica papaya evm.TU.supercontig_74.64 I 0.339
Ca_02416 Cicer arietinum Ca_02416 I 0.334
Ca_07234 Cicer arietinum Ca_07234 I 0.332
Cla011664 Citrullus lanatus Cla011664 I 0.339
Ciclev10005649m.g Citrus clementina Ciclev10005649m.g I 0.329
Ciclev10021287m.g Citrus clementina Ciclev10021287m.g I 0.334
orange1.1g025781m.g Citrus sinensis orange1.1g025781m.g I 0.329
Cucsa.206000 Cucumis sativus Cucsa.206000 I 0.339
Eucgr.E00555 Eucalyptus grandis Eucgr.E00555 I 0.337
Eucgr.A02338 Eucalyptus grandis Eucgr.A02338 I 0.329
Thhalv10017795m.g Eutrema salsugineum Thhalv10017795m.g I 0.326
Thhalv10028744m.g Eutrema salsugineum Thhalv10028744m.g I 0.339
gene02464-v1.0-hybrid Fragaria vesca gene02464-v1.0-hybrid I 0.334
gene32416-v1.0-hybrid Fragaria vesca gene32416-v1.0-hybrid I 0.324
GLYMA01G42640 Glycine max GLYMA01G42640 I 0.334
GLYMA03G29190 Glycine max GLYMA03G29190 I 0.319
GLYMA10G07620 Glycine max GLYMA10G07620 I 0.322
GLYMA11G02800 Glycine max GLYMA11G02800 I 0.335
Gorai.008G244400 Gossypium raimondii Gorai.008G244400 I 0.336
Gorai.003G160600 Gossypium raimondii Gorai.003G160600 I 0.340
MLOC_75166 Hordeum vulgare MLOC_75166 I 0.325
LPERR09G13100 Leersia perrieri LPERR09G13100 I 0.342
LPERR08G19290 Leersia perrieri LPERR08G19290 I 0.343
LPERR04G18020 Leersia perrieri LPERR04G18020 I 0.332
Lus10008007.g Linum usitatissimum Lus10008007.g I 0.340
Lus10024508.g Linum usitatissimum Lus10024508.g I 0.340
chr2.CM0304.780.nc Lotus japonicus chr2.CM0304.780.nc I 0.334
LjSGA_040741.1 Lotus japonicus LjSGA_040741.1 I 0.332
MDP0000127499 Malus domestica MDP0000127499 I 0.322
cassava43059.valid.m1 Manihot esculenta cassava43059.valid.m1 I 0.329
cassava7014.valid.m1 Manihot esculenta cassava7014.valid.m1 I 0.339
MTR_7g091370 Medicago truncatula MTR_7g091370 I 0.331
MTR_5g010680 Medicago truncatula MTR_5g010680 I 0.323
mgf002110m Mimulus guttatus mgf002110m I 0.330
mgf014237m Mimulus guttatus mgf014237m I 0.337
mgf004940m Mimulus guttatus mgf004940m I 0.326
GSMUA_Achr1G03910_001 Musa acuminata GSMUA_Achr1G03910_001 I 0.324
GSMUA_Achr1G16240_001 Musa acuminata GSMUA_Achr1G16240_001 I 0.331
GSMUA_Achr4G19760_001 Musa acuminata GSMUA_Achr4G19760_001 I 0.339
GSMUA_Achr4G29100_001 Musa acuminata GSMUA_Achr4G29100_001 I 0.339
GSMUA_Achr1G07880_001 Musa acuminata GSMUA_Achr1G07880_001 I 0.325
OBART04G22030 Oryza barthii OBART04G22030 I 0.332
OBART08G22550 Oryza barthii OBART08G22550 I 0.342
OB08G29340 Oryza brachyantha OB08G29340 I 0.343
OB04G29050 Oryza brachyantha OB04G29050 I 0.332
ORGLA08G0219000 Oryza glaberrima ORGLA08G0219000 I 0.343
ORGLA04G0190900 Oryza glaberrima ORGLA04G0190900 I 0.332
OGLUM04G22060 Oryza glumaepatula OGLUM04G22060 I 0.332
OGLUM08G23900 Oryza glumaepatula OGLUM08G23900 I 0.343
OGLUM09G17660 Oryza glumaepatula OGLUM09G17660 I 0.342
BGIOSGA026537 Oryza indica BGIOSGA026537 I 0.343
BGIOSGA011509 Oryza indica BGIOSGA011509 I 0.342
BGIOSGA016941 Oryza indica BGIOSGA016941 I 0.332
BGIOSGA029403 Oryza indica BGIOSGA029403 I 0.342
OLONG_012454 Oryza longistaminata OLONG_012454 I 0.332
OMERI03G25120 Oryza meridionalis OMERI03G25120 I 0.345
OMERI09G12670 Oryza meridionalis OMERI09G12670 I 0.342
OMERI04G18580 Oryza meridionalis OMERI04G18580 I 0.332
OMERI08G17470 Oryza meridionalis OMERI08G17470 I 0.343
ONIVA08G25630 Oryza nivara ONIVA08G25630 I 0.343
ONIVA04G20610 Oryza nivara ONIVA04G20610 I 0.332
ONIVA09G18150 Oryza nivara ONIVA09G18150 I 0.342
OPUNC04G19790 Oryza punctata OPUNC04G19790 I 0.332
OPUNC08G20670 Oryza punctata OPUNC08G20670 I 0.343
OPUNC09G15460 Oryza punctata OPUNC09G15460 I 0.342
ORUFI09G18440 Oryza rufipogon ORUFI09G18440 I 0.342
ORUFI08G25100 Oryza rufipogon ORUFI08G25100 I 0.343
ORUFI04G23680 Oryza rufipogon ORUFI04G23680 I 0.332
HSFB2B Oryza sativa OS08G0546800 I 0.343
HSFB2A Oryza sativa OS04G0568700 I 0.332
HSFB2C Oryza sativa OS09G0526600 I 0.342
Pavir.Ga00998 Panicum virgatum Pavir.Ga00998 I 0.332
Pavir.Ba01265 Panicum virgatum Pavir.Ba01265 I 0.327
Pavir.Fb02392 Panicum virgatum Pavir.Fb02392 I 0.332
Pavir.J03297 Panicum virgatum Pavir.J03297 I 0.342
POPTR_0001s08990 Populus trichocarpa POPTR_0001s08990 I 0.340
POPTR_0006s04770 Populus trichocarpa POPTR_0006s04770 I 0.324
POPTR_0016s05680 Populus trichocarpa POPTR_0016s05680 I 0.330
Pm023788 Prunus mume Pm023788 I 0.322
Pm029600 Prunus mume Pm029600 I 0.333
PRUPE_ppa008441mg Prunus persica PRUPE_ppa008441mg I 0.322
PRUPE_ppa014675mg Prunus persica PRUPE_ppa014675mg I 0.333
30006.m000287 Ricinus communis 30006.m000287 I 0.328
30190.m011156 Ricinus communis 30190.m011156 I 0.340
SapurV1A.0228s0170 Salix purpurea SapurV1A.0228s0170 I 0.328
SapurV1A.0507s0120 Salix purpurea SapurV1A.0507s0120 I 0.340
Si030094m.g Setaria italica Si030094m.g I 0.342
Solyc08g080540.2 Solanum lycopersicum Solyc08g080540.2 I 0.336
Solyc04g016000.2 Solanum lycopersicum Solyc04g016000.2 I 0.319
Solyc03g026020.2 Solanum lycopersicum Solyc03g026020.2 I 0.328
PGSC0003DMG400014323 Solanum tuberosum PGSC0003DMG400014323 I 0.335
PGSC0003DMG400003053 Solanum tuberosum PGSC0003DMG400003053 I 0.338
PGSC0003DMG400027283 Solanum tuberosum PGSC0003DMG400027283 I 0.321
PGSC0003DMG400012105 Solanum tuberosum PGSC0003DMG400012105 I 0.338
Sb02g030490 Sorghum bicolor Sb02g030490 I 0.343
Sb07g025120 Sorghum bicolor Sb07g025120 I 0.327
Sb06g025710 Sorghum bicolor Sb06g025710 I 0.332
TCM_024565 Theobroma cacao TCM_024565 I 0.328
TCM_016198 Theobroma cacao TCM_016198 I 0.340
Traes_5BL_FCB1625F3 Triticum aestivum Traes_5BL_FCB1625F3 I 0.324
TRIUR3_31165 Triticum urartu TRIUR3_31165 I 0.323
AT-HSFB3 Vitis vinifera VIT_08s0007g08750 I 0.330
AT-HSFB2B Vitis vinifera VIT_02s0025g04170 I 0.339
GRMZM2G098696 Zea mays GRMZM2G098696 I 0.340
GRMZM2G164909 Zea mays GRMZM2G164909 I 0.339
GRMZM2G301485 Zea mays GRMZM2G301485 I 0.332
GRMZM2G165272 Zea mays GRMZM2G165272 I 0.342