Phatr3_J45560 (Phaeodactylum tricornutum)
HSF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00447 (HSF_DNA-bind) IPR000232 Phatr3_J45560 T241717_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HSFA6B
M06941_2.00 		Arabidopsis thaliana
RGAASNTTCTAGA
TCTAGAANSTTCY		 Dap-seq
OMalley et al.(2016)
HSFA6B_colamp_a 		0.326 0.348
HSFA6B
M06942_2.00 		Arabidopsis thaliana
RGAABNTTCTRGAAN
NTTCYAGAANVTTCY		 Dap-seq
OMalley et al.(2016)
HSFA6B_col 		0.326 0.348
For this family, TFs with SR scores > 0.318 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Phatr3_J45560.p1 HSF 114 213

Links

Other HSF family TFs
Other Phaeodactylum tricornutum TFs

99 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Phatr3_J45559 Phaeodactylum tricornutum Phatr3_J45559 I 0.506
Phatr3_J45926 Phaeodactylum tricornutum Phatr3_J45926 N 0.407
Thaps22414 Thalassiosira pseudonana Thaps22414 N 0.392
Thaps264036 Thalassiosira pseudonana Thaps264036 N 0.386
HSF1 Phaeodactylum tricornutum Phatr3_J44099 N 0.382
Phatr3_J45206 Phaeodactylum tricornutum Phatr3_J45206 N 0.360
Thaps25112 Thalassiosira pseudonana Thaps25112 N 0.356
Thaps5010 Thalassiosira pseudonana Thaps5010 N 0.355
Phatr3_J31764 Phaeodactylum tricornutum Phatr3_J31764 N 0.355
Phatr3_EG02327 Phaeodactylum tricornutum Phatr3_EG02327 N 0.348
gw1.21.273.1 Fragilariopsis cylindrus gw1.21.273.1 N 0.346
Phatr3_J48361 Phaeodactylum tricornutum Phatr3_J48361 N 0.342
e_gw1.21.303.1 Fragilariopsis cylindrus e_gw1.21.303.1 N 0.337
Thaps269233 Thalassiosira pseudonana Thaps269233 N 0.336
VIT_00s0179g00150 Vitis vinifera VIT_00s0179g00150 I 0.331
SELMODRAFT_109000 Selaginella moellendorffii SELMODRAFT_109000 I 0.331
SELMODRAFT_93081 Selaginella moellendorffii SELMODRAFT_93081 I 0.331
M407DRAFT_33252 Tulasnella calospora M407DRAFT_33252 N 0.331
gene02408-v1.0-hybrid Fragaria vesca gene02408-v1.0-hybrid I 0.328
Thhalv10020829m.g Eutrema salsugineum Thhalv10020829m.g I 0.327
GSMUA_Achr8G20520_001 Musa acuminata GSMUA_Achr8G20520_001 I 0.327
Carubv10013808m.g Capsella rubella Carubv10013808m.g I 0.326
SapurV1A.0350s0180 Salix purpurea SapurV1A.0350s0180 I 0.326
HSFA6B Arabidopsis thaliana AT3G22830 D 0.326
Bostr.30275s0239 Boechera stricta Bostr.30275s0239 I 0.325
Bra033913 Brassica rapa Bra033913 I 0.325
Bo5g093470 Brassica oleracea Bo5g093470 I 0.325
HSFA1A Arabidopsis thaliana AT4G17750 I 0.325
HSF1 Arabidopsis lyrata fgenesh2_kg.7__2533__AT4G17750.1 I 0.325
Eucgr.E00253 Eucalyptus grandis Eucgr.E00253 I 0.325
AT-HSFA6B Arabidopsis lyrata fgenesh2_kg.3__2495__AT3G22830.1 I 0.325
29844.m003222 Ricinus communis 29844.m003222 I 0.324
POPTR_0008s15740 Populus trichocarpa POPTR_0008s15740 I 0.324
GSMUA_Achr2G21640_001 Musa acuminata GSMUA_Achr2G21640_001 I 0.324
GLYMA03G31381 Glycine max GLYMA03G31381 I 0.324
MDP0000119199 Malus domestica MDP0000119199 I 0.324
28539 Aureococcus anophagefferens 28539 N 0.324
Cla009775 Citrullus lanatus Cla009775 I 0.324
Solyc08g005170.2 Solanum lycopersicum Solyc08g005170.2 I 0.324
PGSC0003DMG400017846 Solanum tuberosum PGSC0003DMG400017846 I 0.324
PRUPE_ppa004782mg Prunus persica PRUPE_ppa004782mg I 0.323
Bostr.19424s0375 Boechera stricta Bostr.19424s0375 I 0.323
30054.m000802 Ricinus communis 30054.m000802 I 0.323
Cla008974 Citrullus lanatus Cla008974 I 0.323
Cucsa.321980 Cucumis sativus Cucsa.321980 I 0.323
PK05866.1 Cannabis sativa PK05866.1 I 0.323
Bra001885 Brassica rapa Bra001885 I 0.323
Bo3g081420 Brassica oleracea Bo3g081420 I 0.323
gene13904-v1.0-hybrid Fragaria vesca gene13904-v1.0-hybrid I 0.323
Pm023178 Prunus mume Pm023178 I 0.322
Gorai.008G225200 Gossypium raimondii Gorai.008G225200 I 0.322
Gorai.003G183900 Gossypium raimondii Gorai.003G183900 I 0.322
GSMUA_Achr6G24430_001 Musa acuminata GSMUA_Achr6G24430_001 I 0.322
OPUNC07G04790 Oryza punctata OPUNC07G04790 I 0.322
BRADI1G55630 Brachypodium distachyon BRADI1G55630 I 0.322
orange1.1g010166m.g Citrus sinensis orange1.1g010166m.g I 0.322
VIT_02s0012g01810 Vitis vinifera VIT_02s0012g01810 I 0.322
AMTR_s00048p00075850 Amborella trichopoda AMTR_s00048p00075850 I 0.322
AMTR_s00040p00209530 Amborella trichopoda AMTR_s00040p00209530 I 0.322
Lus10000312.g Linum usitatissimum Lus10000312.g I 0.322
TCM_016563 Theobroma cacao TCM_016563 I 0.322
Lus10040091.g Linum usitatissimum Lus10040091.g I 0.321
Phatr3_J43413 Phaeodactylum tricornutum Phatr3_J43413 N 0.321
cassava44108.valid.m1 Manihot esculenta cassava44108.valid.m1 I 0.320
ATHSFA1D Arabidopsis lyrata fgenesh2_kg.1__3374__AT1G32330.1 I 0.320
Aquca_005_00532 Aquilegia coerulea Aquca_005_00532 I 0.320
cassava44107.valid.m1 Manihot esculenta cassava44107.valid.m1 I 0.320
Thaps10613 Thalassiosira pseudonana Thaps10613 N 0.320
Bostr.3359s0126 Boechera stricta Bostr.3359s0126 I 0.320
Ca_11487 Cicer arietinum Ca_11487 I 0.320
Lus10011065.g Linum usitatissimum Lus10011065.g I 0.320
AMTR_s00069p00130920 Amborella trichopoda AMTR_s00069p00130920 I 0.320
Lus10030956.g Linum usitatissimum Lus10030956.g I 0.320
Thhalv10025116m.g Eutrema salsugineum Thhalv10025116m.g I 0.319
MDP0000273175 Malus domestica MDP0000273175 I 0.319
MDP0000253499 Malus domestica MDP0000253499 I 0.319
MDP0000319910 Malus domestica MDP0000319910 I 0.319
Pavir.Ba03710 Panicum virgatum Pavir.Ba03710 I 0.319
Pavir.J18081 Panicum virgatum Pavir.J18081 I 0.319
SapurV1A.0852s0050 Salix purpurea SapurV1A.0852s0050 I 0.319
Si030256m.g Setaria italica Si030256m.g I 0.319
GRMZM2G125969 Zea mays GRMZM2G125969 I 0.319
GSMUA_Achr1G27200_001 Musa acuminata GSMUA_Achr1G27200_001 I 0.319
MLOC_75519 Hordeum vulgare MLOC_75519 I 0.319
GLYMA09G33920 Glycine max GLYMA09G33920 I 0.319
Bra040179 Brassica rapa Bra040179 I 0.319
BGIOSGA025247 Oryza indica BGIOSGA025247 I 0.319
Bo1g017810 Brassica oleracea Bo1g017810 I 0.319
OBART07G04960 Oryza barthii OBART07G04960 I 0.319
OGLUM07G04480 Oryza glumaepatula OGLUM07G04480 I 0.319
ORUFI07G04770 Oryza rufipogon ORUFI07G04770 I 0.319
HSFA2B Oryza sativa OS07G0178600 I 0.319
POPTR_0003s09370 Populus trichocarpa POPTR_0003s09370 I 0.319
evm.TU.supercontig_90.16 Carica papaya evm.TU.supercontig_90.16 I 0.319
ORGLA07G0042500 Oryza glaberrima ORGLA07G0042500 I 0.319
OLONG_011402 Oryza longistaminata OLONG_011402 I 0.319
OMERI07G03500 Oryza meridionalis OMERI07G03500 I 0.319
ONIVA07G03730 Oryza nivara ONIVA07G03730 I 0.319
HSFA1D Arabidopsis thaliana AT1G32330 I 0.318