Phatr3_J49594 (Phaeodactylum tricornutum)
HSF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00447 (HSF_DNA-bind) IPR000232 Phatr3_J49594 T241734_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HSF1
M00060_2.00 		Saccharomyces cerevisiae
NNNTTCNNN
NNNGAANNN		 PBM
Badis et al.(2008)
HSF1_4530 		0.320 0.348
HSF1
M07489_2.00 		Saccharomyces cerevisiae
HVTTCCAT
ATGGAABD		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0319.1 		0.320 0.348
HSF1
M08577_2.00 		Saccharomyces cerevisiae
TTCTAGAA
TTCTAGAA		 Misc
DeBoer et al.(2011)
YGL073W_1461 		0.320 0.348
HSF1
M08578_2.00 		Saccharomyces cerevisiae
GAANNNNNWRGAA
TTCYWNNNNNTTC		 Misc
DeBoer et al.(2011)
YGL073W_411 		0.320 0.348
HSF1
M08579_2.00 		Saccharomyces cerevisiae
HVTTCCAT
ATGGAABD		 Misc
DeBoer et al.(2011)
YGL073W_476 		0.320 0.348
HSF1
M08580_2.00 		Saccharomyces cerevisiae
RGAABNTTCTRGAA
TTCYAGAANVTTCY		 Misc
DeBoer et al.(2011)
YGL073W_615 		0.320 0.348
HSF1
M10874_2.00 		Saccharomyces cerevisiae
RGAANRGAANRGAAN
NTTCYNTTCYNTTCY		 Transfac
Matys et al.(2006)
F$HSF_02 		0.320 0.348
HSF1
M10875_2.00 		Saccharomyces cerevisiae
RGAANNTTCYNTTCY
RGAANRGAANNTTCY		 Transfac
Matys et al.(2006)
F$HSF_03 		0.320 0.348
HSF1
M10876_2.00 		Saccharomyces cerevisiae
RGAANNTTCYRGAAN
NTTCYRGAANNTTCY		 Transfac
Matys et al.(2006)
F$HSF_04 		0.320 0.348
HSF1
M10877_2.00 		Saccharomyces cerevisiae
NTTCYNTTCYRGAAN
NTTCYRGAANRGAAN		 Transfac
Matys et al.(2006)
F$HSF_05 		0.320 0.348
HSF1
M10878_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$HSF_Q6 		0.320 0.348
For this family, TFs with SR scores > 0.318 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Phatr3_J49594.p1 HSF 101 196

Links

Other HSF family TFs
Other Phaeodactylum tricornutum TFs

75 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Phatr3_EG01933 Phaeodactylum tricornutum Phatr3_EG01933 N 0.434
Phatr3_J49557 Phaeodactylum tricornutum Phatr3_J49557 N 0.432
Phatr3_J49566 Phaeodactylum tricornutum Phatr3_J49566 N 0.412
Phatr3_J49567 Phaeodactylum tricornutum Phatr3_J49567 N 0.406
HSF2 Phaeodactylum tricornutum Phatr3_J55070 N 0.404
estExt_Genewise1Plus.C_91152 Fragilariopsis cylindrus estExt_Genewise1Plus.C_91152 I 0.403
Phatr3_J48667 Phaeodactylum tricornutum Phatr3_J48667 N 0.399
Phatr3_J48361 Phaeodactylum tricornutum Phatr3_J48361 N 0.397
Thaps22454 Thalassiosira pseudonana Thaps22454 I 0.393
Thaps263978 Thalassiosira pseudonana Thaps263978 N 0.388
Phatr3_Jdraft1650 Phaeodactylum tricornutum Phatr3_Jdraft1650 N 0.383
Phatr3_J39785 Phaeodactylum tricornutum Phatr3_J39785 N 0.382
Thaps22570 Thalassiosira pseudonana Thaps22570 I 0.381
Phatr3_J44684 Phaeodactylum tricornutum Phatr3_J44684 N 0.376
Phatr3_EG00212 Phaeodactylum tricornutum Phatr3_EG00212 N 0.376
gw1.2.1206.1 Fragilariopsis cylindrus gw1.2.1206.1 N 0.375
Phatr3_J44917 Phaeodactylum tricornutum Phatr3_J44917 N 0.375
Thaps23801 Thalassiosira pseudonana Thaps23801 N 0.373
Phatr3_EG00322 Phaeodactylum tricornutum Phatr3_EG00322 N 0.371
Phatr3_J48558 Phaeodactylum tricornutum Phatr3_J48558 N 0.371
e_gw1.2.1757.1 Fragilariopsis cylindrus e_gw1.2.1757.1 N 0.371
Thaps22932 Thalassiosira pseudonana Thaps22932 N 0.370
Phatr3_J48394 Phaeodactylum tricornutum Phatr3_J48394 N 0.369
Phatr3_J49596 Phaeodactylum tricornutum Phatr3_J49596 N 0.369
Phatr3_J43363 Phaeodactylum tricornutum Phatr3_J43363 N 0.368
Phatr3_EG02471 Phaeodactylum tricornutum Phatr3_EG02471 N 0.367
gw1.26.222.1 Fragilariopsis cylindrus gw1.26.222.1 N 0.363
Phatr3_J44586 Phaeodactylum tricornutum Phatr3_J44586 N 0.362
Phatr3_J48572 Phaeodactylum tricornutum Phatr3_J48572 N 0.360
Phatr3_EG00672 Phaeodactylum tricornutum Phatr3_EG00672 N 0.356
estExt_fgenesh2_pg.C_40667 Fragilariopsis cylindrus estExt_fgenesh2_pg.C_40667 N 0.354
Phatr3_J48702 Phaeodactylum tricornutum Phatr3_J48702 N 0.353
gw1.1.2017.1 Fragilariopsis cylindrus gw1.1.2017.1 N 0.353
Thaps10613 Thalassiosira pseudonana Thaps10613 N 0.351
e_gw1.2.349.1 Fragilariopsis cylindrus e_gw1.2.349.1 N 0.351
Phatr3_J43364 Phaeodactylum tricornutum Phatr3_J43364 N 0.346
e_gw1.11.455.1 Fragilariopsis cylindrus e_gw1.11.455.1 N 0.346
Thaps21513 Thalassiosira pseudonana Thaps21513 N 0.344
Thaps6958 Thalassiosira pseudonana Thaps6958 N 0.343
Thaps268481 Thalassiosira pseudonana Thaps268481 N 0.341
Bra002882 Brassica rapa Bra002882 I 0.340
Phatr3_J39786 Phaeodactylum tricornutum Phatr3_J39786 N 0.340
e_gw1.5.1185.1 Fragilariopsis cylindrus e_gw1.5.1185.1 N 0.340
Phatr3_J49620 Phaeodactylum tricornutum Phatr3_J49620 N 0.340
gw1.22.133.1 Fragilariopsis cylindrus gw1.22.133.1 N 0.340
Phatr3_J34415 Phaeodactylum tricornutum Phatr3_J34415 I 0.339
HSF1 Phaeodactylum tricornutum Phatr3_J44099 N 0.338
Thaps22135 Thalassiosira pseudonana Thaps22135 N 0.337
Thaps262668 Thalassiosira pseudonana Thaps262668 N 0.337
Thaps12066 Thalassiosira pseudonana Thaps12066 N 0.336
Thaps264072 Thalassiosira pseudonana Thaps264072 N 0.335
fgenesh2_pg.4_#_65 Fragilariopsis cylindrus fgenesh2_pg.4_#_65 N 0.335
CAGL0H03443g Candida glabrata CAGL0H03443g I 0.333
Thaps264346 Thalassiosira pseudonana Thaps264346 I 0.331
fgenesh2_kg.1_#_319_#_2595_1_CCUX_EXTA Fragilariopsis cylindrus fgenesh2_kg.1_#_319_#_2595_1_CCUX_EXTA N 0.331
Phatr3_J43051 Phaeodactylum tricornutum Phatr3_J43051 N 0.330
Bra030021 Brassica rapa Bra030021 I 0.330
gw1.90.39.1 Fragilariopsis cylindrus gw1.90.39.1 N 0.327
estExt_Genewise1Plus.C_130130 Fragilariopsis cylindrus estExt_Genewise1Plus.C_130130 N 0.327
gw1.21.273.1 Fragilariopsis cylindrus gw1.21.273.1 N 0.326
fgenesh2_pg.26_#_250 Fragilariopsis cylindrus fgenesh2_pg.26_#_250 N 0.322
SU7_1143 Saccharomyces arboricola SU7_1143 I 0.322
Thaps269233 Thalassiosira pseudonana Thaps269233 N 0.322
SKUD_205711 Saccharomyces kudriavzevii SKUD_205711 I 0.322
Thaps8654 Thalassiosira pseudonana Thaps8654 I 0.321
8607_YGL073W Saccharomyces paradoxus 8607_YGL073W I 0.320
ENSLOCG00000002988 Lepisosteus oculatus ENSLOCG00000002988 I 0.320
7859_YGL073W Saccharomyces mikatae 7859_YGL073W I 0.320
HSF1 Saccharomyces cerevisiae YGL073W D 0.320
Thaps25112 Thalassiosira pseudonana Thaps25112 N 0.320
ZBAI_09737 Zygosaccharomyces bailii ZBAI_09737 I 0.320
CMO187C Cyanidioschyzon merolae CMO187C I 0.320
ZBAI_03930 Zygosaccharomyces bailii ZBAI_03930 I 0.320
Thaps9607 Thalassiosira pseudonana Thaps9607 N 0.318
Cagra.2848s0007 Capsella grandiflora Cagra.2848s0007 I 0.318