RHTO_01429 (Rhodosporidium toruloides)
HSF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00447 (HSF_DNA-bind) IPR000232 RHTO_01429 T241959_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
HSF4
M03325_2.00
Homo sapiens
GAANNTTCBVGAA

TTCBVGAANNTTC
SELEX
Jolma et al.(2013)
HSF4_1
0.405 0.542
HSF4
M05509_2.00
Homo sapiens
VGAABVTTCKVGAAN

NTTCBMGAABVTTCB
SELEX
Yin et al.(2017)
HSF4_eDBD_HT-SELEX
0.405 0.542
HSF4
M10862_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HSF4_Q3
0.405 0.542
HSF4
M05510_2.00
Homo sapiens
RGAABVWDCYRGAWN

NWTCYRGHWBVTTCY
SELEX
Yin et al.(2017)
HSF4_eDBD_Methyl-HT-SELEX
0.405 0.542
HSF1
M03329_2.00
Homo sapiens
GAANVTTCBVGAA

TTCBVGAABNTTC
SELEX
Jolma et al.(2013)
HSF1_1
0.378 0.562
HSF1
M03330_2.00
Homo sapiens
GAANRTTCBAGAA

TTCTVGAAYNTTC
SELEX
Jolma et al.(2013)
HSF1_2
0.378 0.562
HSF1
M05523_2.00
Homo sapiens
VGAABVTTCBVGAWN

NWTCBVGAABVTTCB
SELEX
Yin et al.(2017)
HSF1_eDBD_HT-SELEX
0.378 0.562
HSF1
M05525_2.00
Homo sapiens
VGAANRTTCKVGAAN

NTTCBMGAAYNTTCB
SELEX
Yin et al.(2017)
HSF1_FL_HT-SELEX
0.378 0.562
HSF1
M07977_2.00
Homo sapiens
GDCSYGGGTTCRADYCCC

GGGRHTYGAACCCRSGHC
ChIP-seq
Gerstein et al.(2012)
HepG2_HSF1_Stanford
0.378 0.562
HSF1
M09230_2.00
Homo sapiens
NRGAANNTTCYRGAA

TTCYRGAANNTTCYN
Misc
Kulakovskiy et al.(2013)
HSF1_HUMAN.H11MO.0.A
0.378 0.562
Hsf1
M09232_2.00
Mus musculus
NRGAANNTTCYRGAA

TTCYRGAANNTTCYN
Misc
Kulakovskiy et al.(2013)
HSF1_MOUSE.H11MO.0.A
0.378 0.562
HSF1
M09592_2.00
Homo sapiens
NNBBCYRGAANNTTCYRGVV

BBCYRGAANNTTCYRGVVNN
Misc
Heinz et al.(2010)
HepG2-HSF1_GSE31477
0.378 0.562
Hsf1
M09593_2.00
Mus musculus
NRGAANNTTCYRGAA

TTCYRGAANNTTCYN
Misc
Heinz et al.(2010)
Striatum-HSF1_GSE38000
0.378 0.562
HSF1
M10863_2.00
Homo sapiens
NGAAHNTTCY

RGAANDTTCN
Transfac
Matys et al.(2006)
V$HSF1_01
0.378 0.562
HSF1
M10864_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HSF1_Q5_01
0.378 0.562
HSF1
M10865_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HSF1_Q5
0.378 0.562
HSF1
M10866_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HSF1_Q6_01
0.378 0.562
HSF1
M10867_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HSF1_Q6
0.378 0.562
HSF1
M10868_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HSF_Q6
0.378 0.562
HSF1
M05524_2.00
Homo sapiens
RGAANRTTCYRGAWN

NWTCYRGAAYNTTCY
SELEX
Yin et al.(2017)
HSF1_eDBD_Methyl-HT-SELEX
0.378 0.562
HSF1
M05526_2.00
Homo sapiens
RGAANVTTCYRGAWN

NWTCYRGAABNTTCY
SELEX
Yin et al.(2017)
HSF1_FL_Methyl-HT-SELEX
0.378 0.562
Hsf2
M09231_2.00
Mus musculus
VGAABVTTCKVGAN

NTCBMGAABVTTCB
Misc
Kulakovskiy et al.(2013)
HSF2_MOUSE.H11MO.0.A
0.372 0.510
ANIA_08035
M02247_2.00
Aspergillus nidulans
NNNNTTCYRN

NYRGAANNNN
PBM
Weirauch et al.(2014)
pTH8231
0.371 0.490
HSF2
M03324_2.00
Homo sapiens
GAANVTTCTAGAA

TTCTAGAABNTTC
SELEX
Jolma et al.(2013)
HSF2_1
0.367 0.510
HSF2
M02744_2.00
Homo sapiens
GAABGTTCTRGA

TCYAGAACVTTC
SELEX
Jolma et al.(2010)
HSF2_dimertrimer
0.367 0.510
HSF2
M05505_2.00
Homo sapiens
VGAABVTTCBVGAWN

NWTCBVGAABVTTCB
SELEX
Yin et al.(2017)
HSF2_eDBD_HT-SELEX
0.367 0.510
HSF2
M05507_2.00
Homo sapiens
VGAANNTTCBVGAAN

NTTCBVGAANNTTCB
SELEX
Yin et al.(2017)
HSF2_FL_HT-SELEX
0.367 0.510
HSF2
M09229_2.00
Homo sapiens
VGAABVTTCKVGAN

NTCBMGAABVTTCB
Misc
Kulakovskiy et al.(2013)
HSF2_HUMAN.H11MO.0.A
0.367 0.510
HSF2
M10859_2.00
Homo sapiens
VGAANNWTCB

VGAWNNTTCB
Transfac
Matys et al.(2006)
V$HSF2_01
0.367 0.510
HSF2
M10860_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HSF2_02
0.367 0.510
HSF2
M10861_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HSF2_Q6
0.367 0.510
HSF2
M05506_2.00
Homo sapiens
RGAABVTTCYRGAWN

NWTCYRGAABVTTCY
SELEX
Yin et al.(2017)
HSF2_eDBD_Methyl-HT-SELEX
0.367 0.510
HSF2
M05508_2.00
Homo sapiens
RGAABVTTCYRGAWN

NWTCYRGAABVTTCY
SELEX
Yin et al.(2017)
HSF2_FL_Methyl-HT-SELEX
0.367 0.510
HSF1
M00060_2.00
Saccharomyces cerevisiae
NNNTTCNNN

NNNGAANNN
PBM
Badis et al.(2008)
HSF1_4530
0.363 0.531
HSF1
M07489_2.00
Saccharomyces cerevisiae
HVTTCCAT

ATGGAABD
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0319.1
0.363 0.531
HSF1
M08577_2.00
Saccharomyces cerevisiae
TTCTAGAA

TTCTAGAA
Misc
DeBoer et al.(2011)
YGL073W_1461
0.363 0.531
HSF1
M08578_2.00
Saccharomyces cerevisiae
GAANNNNNWRGAA

TTCYWNNNNNTTC
Misc
DeBoer et al.(2011)
YGL073W_411
0.363 0.531
HSF1
M08579_2.00
Saccharomyces cerevisiae
HVTTCCAT

ATGGAABD
Misc
DeBoer et al.(2011)
YGL073W_476
0.363 0.531
HSF1
M08580_2.00
Saccharomyces cerevisiae
RGAABNTTCTRGAA

TTCYAGAANVTTCY
Misc
DeBoer et al.(2011)
YGL073W_615
0.363 0.531
HSF1
M10874_2.00
Saccharomyces cerevisiae
RGAANRGAANRGAAN

NTTCYNTTCYNTTCY
Transfac
Matys et al.(2006)
F$HSF_02
0.363 0.531
HSF1
M10875_2.00
Saccharomyces cerevisiae
RGAANNTTCYNTTCY

RGAANRGAANNTTCY
Transfac
Matys et al.(2006)
F$HSF_03
0.363 0.531
HSF1
M10876_2.00
Saccharomyces cerevisiae
RGAANNTTCYRGAAN

NTTCYRGAANNTTCY
Transfac
Matys et al.(2006)
F$HSF_04
0.363 0.531
HSF1
M10877_2.00
Saccharomyces cerevisiae
NTTCYNTTCYRGAAN

NTTCYRGAANRGAAN
Transfac
Matys et al.(2006)
F$HSF_05
0.363 0.531
HSF1
M10878_2.00
Saccharomyces cerevisiae Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$HSF_Q6
0.363 0.531
hsf2
M02248_2.00
Danio rerio
NNNWGTTCTATNN

NNATAGAACWNNN
PBM
Weirauch et al.(2014)
pTH9010
0.361 0.531
hsf-1
M02249_2.00
Neurospora crassa
NNNTTCBDNN

NNHVGAANNN
PBM
Weirauch et al.(2014)
pTH8857
0.360 0.479
For this family, TFs with SR scores > 0.318 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EMS21782 HSF 56 160

Links

Other HSF family TFs
Other Rhodosporidium toruloides TFs

Invalid Input OrderBy

569 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action