RHTO_03255 (Rhodosporidium toruloides)
HSF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00447 (HSF_DNA-bind) IPR000232 RHTO_03255 T241962_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
SKN7
M00061_2.00
Saccharomyces cerevisiae
AYGGCCRG

CYGGCCRT
PBM
Badis et al.(2008)
SKN7_2117
0.368 0.604
SKN7
M01555_2.00
Saccharomyces cerevisiae
NBGGCBDNNN

NNNHVGCCVN
PBM
Zhu et al.(2009)
Skn7
0.368 0.604
SKN7
M07490_2.00
Saccharomyces cerevisiae
GGCCRN

NYGGCC
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0381.1
0.368 0.604
SKN7
M08582_2.00
Saccharomyces cerevisiae
GBCBVGSCS

SGSCBVGVC
Misc
DeBoer et al.(2011)
YHR206W_380
0.368 0.604
SKN7
M08583_2.00
Saccharomyces cerevisiae
GGCCRN

NYGGCC
Misc
DeBoer et al.(2011)
YHR206W_583
0.368 0.604
For this family, TFs with SR scores > 0.318 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EMS25526 HSF 125 225

Links

Other HSF family TFs
Other Rhodosporidium toruloides TFs

257 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Ca_08371 Cicer arietinum Ca_08371 I 0.000
chr5.CM0909.750.nc Lotus japonicus chr5.CM0909.750.nc I 0.000
Ciclev10031606m.g Citrus clementina Ciclev10031606m.g I 0.000
Cla020838 Citrullus lanatus Cla020838 I 0.000
Cucsa.308760 Cucumis sativus Cucsa.308760 I 0.000
gene23561-v1.0-hybrid Fragaria vesca gene23561-v1.0-hybrid I 0.000
GLYMA10G34130 Glycine max GLYMA10G34130 I 0.000
GLYMA20G33430 Glycine max GLYMA20G33430 I 0.000
Gorai.012G007000 Gossypium raimondii Gorai.012G007000 I 0.000
MDP0000258167 Malus domestica MDP0000258167 I 0.000
mgf012700m Mimulus guttatus mgf012700m N 0.000
mgf020265m Mimulus guttatus mgf020265m I 0.000
MTR_1g090720 Medicago truncatula MTR_1g090720 I 0.000
orange1.1g014130m.g Citrus sinensis orange1.1g014130m.g I 0.000
PGSC0003DMG401023373 Solanum tuberosum PGSC0003DMG401023373 I 0.000
PK06477.1 Cannabis sativa PK06477.1 I 0.000
POPTR_0010s23630 Populus trichocarpa POPTR_0010s23630 I 0.000
SapurV1A.0213s0310 Salix purpurea SapurV1A.0213s0310 I 0.000
Solyc05g055480.2 Solanum lycopersicum Solyc05g055480.2 I 0.000
Solyc11g008010.1 Solanum lycopersicum Solyc11g008010.1 N 0.000