scaffold_401284.1 (Arabidopsis lyrata)
HSF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00447 (HSF_DNA-bind) IPR000232 scaffold_401284.1 T242013_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
HSFA4A
M06947_2.00
Arabidopsis thaliana
NNNRGAABBTTCTAGAANN

NNTTCTAGAAVVTTCYNNN
Dap-seq
OMalley et al.(2016)
HSF21_col_a
0.363 0.688
HSFB2B
M06945_2.00
Arabidopsis thaliana
RGAANNTTCTAGAA

TTCTAGAANNTTCY
Dap-seq
OMalley et al.(2016)
HSF7_col_a
0.339 0.500
HSFB2B
M06946_2.00
Arabidopsis thaliana
RGAANNTTCTAGAA

TTCTAGAANNTTCY
Dap-seq
OMalley et al.(2016)
HSF7_colamp_a
0.339 0.500
HSFB2A
M00869_2.00
Arabidopsis thaliana
NNNNNTTCB

VGAANNNNN
PBM
Franco-Zorrilla et al.(2014)
HSFB2A
0.331 0.521
HSFB2A
M06952_2.00
Arabidopsis thaliana
GAANNTTCYAGA

TCTRGAANNTTC
Dap-seq
OMalley et al.(2016)
HSF6_col_a
0.331 0.521
HSFB3
M06937_2.00
Arabidopsis thaliana
RRAANMWTCTAGAAV

BTTCTAGAWKNTTYY
Dap-seq
OMalley et al.(2016)
HSFB3_col_a
0.320 0.500
HSFB3
M06938_2.00
Arabidopsis thaliana
AABSTTCTAGAAN

NTTCTAGAASVTT
Dap-seq
OMalley et al.(2016)
HSFB3_colamp_a
0.320 0.500
For this family, TFs with SR scores > 0.318 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
scaffold_401284.1 HSF 14 67

Links

Other HSF family TFs
Other Arabidopsis lyrata TFs

447 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSAMEG00000012625 Ailuropoda melanoleuca ENSAMEG00000012625 I 0.000
ENSACAG00000001199 Anolis carolinensis ENSACAG00000001199 I 0.000
ENSAMXG00000001508 Astyanax mexicanus ENSAMXG00000001508 I 0.000
ENSAMXG00000004711 Astyanax mexicanus ENSAMXG00000004711 I 0.000
ENSBTAG00000005863 Bos taurus ENSBTAG00000005863 I 0.000
ENSCJAG00000018699 Callithrix jacchus ENSCJAG00000018699 I 0.000
ATF2 Callithrix jacchus ENSCJAG00000008085 I 0.000
ENSCAFG00000006726 Canis familiaris ENSCAFG00000006726 I 0.000
ENSCPOG00000000973 Cavia porcellus ENSCPOG00000000973 I 0.000
ENSCSAG00000005473 Chlorocebus sabaeus ENSCSAG00000005473 I 0.000
ENSCHOG00000010269 Choloepus hoffmanni ENSCHOG00000010269 I 0.000
atf2 Danio rerio ENSDARG00000023903 I 0.000
atf7b Danio rerio ENSDARG00000055481 I 0.000
atf7a Danio rerio ENSDARG00000011298 I 0.000
ENSDNOG00000008735 Dasypus novemcinctus ENSDNOG00000008735 I 0.000
ENSETEG00000002463 Echinops telfairi ENSETEG00000002463 I 0.000
ENSGALG00000003038 Gallus gallus ENSGALG00000003038 I 0.000
atf7b Gasterosteus aculeatus ENSGACG00000000679 I 0.000
atf7a Gasterosteus aculeatus ENSGACG00000008417 I 0.000
ATF7 Gorilla gorilla ENSGGOG00000015195 I 0.000
HelroG137277 Helobdella robusta HelroG137277 N 0.000
ATF7 Homo sapiens ENSG00000170653 D 0.000
AC023509.3 Homo sapiens ENSG00000267281 I 0.000
ATF2 Homo sapiens ENSG00000115966 D 0.000
ENSSTOG00000006788 Ictidomys tridecemlineatus ENSSTOG00000006788 I 0.000
ENSLACG00000004713 Latimeria chalumnae ENSLACG00000004713 I 0.000
ENSLOCG00000006882 Lepisosteus oculatus ENSLOCG00000006882 I 0.000
ENSLOCG00000007222 Lepisosteus oculatus ENSLOCG00000007222 I 0.000
ENSLAFG00000002626 Loxodonta africana ENSLAFG00000002626 I 0.000
ENSP00000329212 Macaca fascicularis ENSP00000329212 I 0.000
ENSMMUG00000022313 Macaca mulatta ENSMMUG00000022313 I 0.000
ENSMEUG00000001927 Macropus eugenii ENSMEUG00000001927 I 0.000
ENSMICG00000011677 Microcebus murinus ENSMICG00000011677 I 0.000
ENSMODG00000027443 Monodelphis domestica ENSMODG00000027443 N 0.000
Atf7 Mus musculus ENSMUSG00000099083 D 0.000
Gm28047 Mus musculus ENSMUSG00000052414 I 0.000
Atf2 Mus musculus ENSMUSG00000027104 D 0.000
NEMVEDRAFT_v1g34679 Nematostella vectensis NEMVEDRAFT_v1g34679 I 0.000
ENSNLEG00000017688 Nomascus leucogenys ENSNLEG00000017688 I 0.000
ENSOPRG00000011431 Ochotona princeps ENSOPRG00000011431 I 0.000
Ocbimv22037954m.g Octopus bimaculoides Ocbimv22037954m.g I 0.000
ENSONIG00000011905 Oreochromis niloticus ENSONIG00000011905 I 0.000
ENSOCUG00000005707 Oryctolagus cuniculus ENSOCUG00000005707 I 0.000
atf7a Oryzias latipes ENSORLG00000006799 I 0.000
creb5b Oryzias latipes ENSORLG00000007509 I 0.000
ENSOGAG00000001748 Otolemur garnettii ENSOGAG00000001748 I 0.000
ENSOARG00000016413 Ovis aries ENSOARG00000016413 I 0.000
ATF7 Pan troglodytes ENSPTRG00000005022 I 0.000
ENSPSIG00000005177 Pelodiscus sinensis ENSPSIG00000005177 I 0.000
ENSPFOG00000013792 Poecilia formosa ENSPFOG00000013792 I 0.000
ENSPFOG00000009541 Poecilia formosa ENSPFOG00000009541 I 0.000
ENSPFOG00000012991 Poecilia formosa ENSPFOG00000012991 I 0.000
ENSPCAG00000005455 Procavia capensis ENSPCAG00000005455 I 0.000
ENSPVAG00000012289 Pteropus vampyrus ENSPVAG00000012289 I 0.000
Atf7 Rattus norvegicus ENSRNOG00000015269 I 0.000
ENSSARG00000001019 Sorex araneus ENSSARG00000001019 I 0.000
SMAR008245 Strigamia maritima SMAR008245 I 0.000
ENSSSCG00000000278 Sus scrofa ENSSSCG00000000278 I 0.000
ENSSSCG00000015972 Sus scrofa ENSSSCG00000015972 N 0.000
atf2 Takifugu rubripes ENSTRUG00000017553 I 0.000
atf7a Takifugu rubripes ENSTRUG00000015923 I 0.000
ENSTRUG00000015448 Takifugu rubripes ENSTRUG00000015448 I 0.000
atf7b Takifugu rubripes ENSTRUG00000007560 I 0.000
atf7b Tetraodon nigroviridis ENSTNIG00000014570 I 0.000
creb5b Tetraodon nigroviridis ENSTNIG00000018431 I 0.000
atf2 Tetraodon nigroviridis ENSTNIG00000016954 I 0.000
atf7a Tetraodon nigroviridis ENSTNIG00000015107 I 0.000
ENSTBEG00000014854 Tupaia belangeri ENSTBEG00000014854 I 0.000
ENSTTRG00000017181 Tursiops truncatus ENSTTRG00000017181 I 0.000
atf2.S Xenopus laevis XB-GENE-6078170 I 0.000
atf7 Xenopus tropicalis XB-GENE-1216213 I 0.000
XP_002935730 Xenopus tropicalis XP_002935730 I 0.000
ENSXMAG00000010537 Xiphophorus maculatus ENSXMAG00000010537 I 0.000
ENSXMAG00000002160 Xiphophorus maculatus ENSXMAG00000002160 I 0.000
ENSXMAG00000000397 Xiphophorus maculatus ENSXMAG00000000397 I 0.000