scaffold_702507.1 (Arabidopsis lyrata)
HSF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00447 (HSF_DNA-bind) IPR000232 scaffold_702507.1 T242021_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
scaffold_702507.1 HSF 14 62

Links

Other HSF family TFs
Other Arabidopsis lyrata TFs

55 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
30026.m001484 Ricinus communis 30026.m001484 I 0.321
AC205471.4_FG003 Zea mays AC205471.4_FG003 I 0.332
BGIOSGA020240 Oryza indica BGIOSGA020240 I 0.327
Bra023800 Brassica rapa Bra023800 I 0.324
BRADI2G18980 Brachypodium distachyon BRADI2G18980 I 0.330
cassava18146.valid.m1 Manihot esculenta cassava18146.valid.m1 I 0.320
CHLREDRAFT_122706 Chlamydomonas reinhardtii CHLREDRAFT_122706 I 0.348
chr5.CM0357.390.nc Lotus japonicus chr5.CM0357.390.nc I 0.323
Ciclev10006902m.g Citrus clementina Ciclev10006902m.g I 0.320
Ciclev10020718m.g Citrus clementina Ciclev10020718m.g I 0.322
Cla021920 Citrullus lanatus Cla021920 I 0.331
Cucsa.254620 Cucumis sativus Cucsa.254620 I 0.331
Eucgr.C03447 Eucalyptus grandis Eucgr.C03447 I 0.329
evm.TU.supercontig_44.122 Carica papaya evm.TU.supercontig_44.122 I 0.320
F775_21225 Aegilops tauschii F775_21225 I 0.332
gene29004-v1.0-hybrid Fragaria vesca gene29004-v1.0-hybrid I 0.328
GLYMA15G09280 Glycine max GLYMA15G09280 I 0.321
Gorai.006G242400 Gossypium raimondii Gorai.006G242400 I 0.327
Gorai.011G168400 Gossypium raimondii Gorai.011G168400 I 0.344
GRMZM2G173090 Zea mays GRMZM2G173090 I 0.322
GSMUA_Achr6G31750_001 Musa acuminata GSMUA_Achr6G31750_001 I 0.319
gw1.24.267.1 Chlorella NC64A gw1.24.267.1 I 0.320
HSFA4D Oryza sativa OS05G0530400 I 0.327
LPERR05G19500 Leersia perrieri LPERR05G19500 I 0.327
Lus10000492.g Linum usitatissimum Lus10000492.g I 0.319
Lus10014698.g Linum usitatissimum Lus10014698.g I 0.319
Lus10039376.g Linum usitatissimum Lus10039376.g I 0.330
OB05G31230 Oryza brachyantha OB05G31230 I 0.327
OBART05G23630 Oryza barthii OBART05G23630 I 0.327
OGLUM05G25010 Oryza glumaepatula OGLUM05G25010 I 0.327
OMERI05G21150 Oryza meridionalis OMERI05G21150 I 0.327
ONIVA05G24200 Oryza nivara ONIVA05G24200 I 0.327
OPUNC05G21050 Oryza punctata OPUNC05G21050 I 0.327
orange1.1g017694m.g Citrus sinensis orange1.1g017694m.g I 0.322
orange1.1g018107m.g Citrus sinensis orange1.1g018107m.g I 0.320
ORUFI05G25150 Oryza rufipogon ORUFI05G25150 I 0.327
Pavir.Ca01519 Panicum virgatum Pavir.Ca01519 I 0.332
PGSC0003DMG400006447 Solanum tuberosum PGSC0003DMG400006447 I 0.327
PGSC0003DMG400016270 Solanum tuberosum PGSC0003DMG400016270 I 0.325
POPTR_0006s11680 Populus trichocarpa POPTR_0006s11680 I 0.324
POPTR_0010s09210 Populus trichocarpa POPTR_0010s09210 I 0.323
SapurV1A.0238s0150 Salix purpurea SapurV1A.0238s0150 I 0.323
SapurV1A.3703s0010 Salix purpurea SapurV1A.3703s0010 I 0.323
Sb09g026440 Sorghum bicolor Sb09g026440 I 0.332
Sb10g022340 Sorghum bicolor Sb10g022340 I 0.323
scaffold_702873.1 Arabidopsis lyrata scaffold_702873.1 I 0.378
SELMODRAFT_107503 Selaginella moellendorffii SELMODRAFT_107503 I 0.319
SELMODRAFT_110881 Selaginella moellendorffii SELMODRAFT_110881 I 0.319
Si022026m.g Setaria italica Si022026m.g I 0.332
Solyc06g053960.2 Solanum lycopersicum Solyc06g053960.2 I 0.319
Solyc09g082670.2 Solanum lycopersicum Solyc09g082670.2 I 0.327
TCM_020700 Theobroma cacao TCM_020700 I 0.325
Thhalv10006463m.g Eutrema salsugineum Thhalv10006463m.g I 0.322
Thhalv10028026m.g Eutrema salsugineum Thhalv10028026m.g I 0.327
VIT_10s0003g01770 Vitis vinifera VIT_10s0003g01770 I 0.321