CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
scaffold_801962.1
(
Arabidopsis lyrata
)
HSF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00447 (HSF_DNA-bind)
IPR000232
scaffold_801962.1
T242025_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
HSFA4A
M06947_2.00
Arabidopsis thaliana
NNNRGAABBTTCTAGAANN
NNTTCTAGAAVVTTCYNNN
Dap-seq
OMalley et al.(2016)
HSF21_col_a
0.326
0.494
For this family, TFs with SR scores >
0.318
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
scaffold_801962.1
HSF
14
95
FRKKLYKIVDDPSTNSIVSWSNNGNSFIIWNESEFCRDVLPRFSHYKEMAPFIRRLGNMGFKKVESEELEYGSDDFVLGLMG
Links
Other
HSF
family TFs
Other
Arabidopsis lyrata
TFs
66 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy