CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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How to cite
snap-par_contig_1252-abinit-gene-0.18
(
Pythium arrhenomanes
)
HSF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00447 (HSF_DNA-bind)
IPR000232
snap-par_contig_1252-abinit-gene-0.18
T242102_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
HSFB2B
M06945_2.00
Arabidopsis thaliana
RGAANNTTCTAGAA
TTCTAGAANNTTCY
Dap-seq
OMalley et al.(2016)
HSF7_col_a
0.324
0.444
HSFB2B
M06946_2.00
Arabidopsis thaliana
RGAANNTTCTAGAA
TTCTAGAANNTTCY
Dap-seq
OMalley et al.(2016)
HSF7_colamp_a
0.324
0.444
For this family, TFs with SR scores >
0.318
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EPrPR00000020294
HSF
42
134
FLRYLFQMLEYEDHAVIAWSHDGAAFQIRDPDELAERVLPKYFKHNKVSSFQRQLNYFGFKKWTKTQTNICTFSHPCFHRDEQDKMRLIKRKE
Links
Other
HSF
family TFs
Other
Pythium arrhenomanes
TFs
200 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy