CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Thaps22124
(
Thalassiosira pseudonana
)
HSF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00447 (HSF_DNA-bind)
IPR000232
Thaps22124
T242211_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Thaps22124
HSF
47
156
FLKKTYTMIESCDDGICAWSEDGTMFVVKDPDAFATNVIPQYFDHNKFSSFARQLNFYGFRKSEFMPTLFQTKPIRNADIDPNTGKHVTFYNEKFRRGRYDLLKTIQRST
Links
Other
HSF
family TFs
Other
Thalassiosira pseudonana
TFs
46 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
estExt_Genewise1.C_61306
Fragilariopsis cylindrus
estExt_Genewise1.C_61306
N
0.490
Phatr3_J42824
Phaeodactylum tricornutum
Phatr3_J42824
N
0.468
Thaps269474
Thalassiosira pseudonana
Thaps269474
N
0.464
Thaps24112
Thalassiosira pseudonana
Thaps24112
N
0.423
e_gw1.8.474.1
Fragilariopsis cylindrus
e_gw1.8.474.1
N
0.408
estExt_fgenesh2_pm.C_560011
Fragilariopsis cylindrus
estExt_fgenesh2_pm.C_560011
N
0.407
HSF3
Phaeodactylum tricornutum
Phatr3_J44200
N
0.385
CMT597C
Cyanidioschyzon merolae
CMT597C
N
0.385
maker-par_contig_3120-fgenesh-gene-0.1
Pythium arrhenomanes
maker-par_contig_3120-fgenesh-gene-0.1
I
0.373
Phatr3_J44029
Phaeodactylum tricornutum
Phatr3_J44029
N
0.373
Phatr3_J45112
Phaeodactylum tricornutum
Phatr3_J45112
N
0.371
Phatr3_J33380
Phaeodactylum tricornutum
Phatr3_J33380
N
0.368
fgenesh2_pg.8_#_244
Fragilariopsis cylindrus
fgenesh2_pg.8_#_244
N
0.366
maker-pag1_scaffold_219-snap-gene-0.16
Pythium aphanidermatum
maker-pag1_scaffold_219-snap-gene-0.16
I
0.364
Phatr3_J34724
Phaeodactylum tricornutum
Phatr3_J34724
N
0.364
maker-piw_contig_424-fgenesh-gene-0.5
Pythium iwayamai
maker-piw_contig_424-fgenesh-gene-0.5
N
0.349
Phyra75445
Phytophthora ramorum
Phyra75445
N
0.346
F443_15755
Phytophthora parasitica
F443_15755
N
0.346
estExt_fgenesh1_kg.C_170233
Phytophthora capsici
estExt_fgenesh1_kg.C_170233
N
0.346
fgenesh_scip_prom.28083.10203
Phytophthora lateralis
fgenesh_scip_prom.28083.10203
N
0.346
PITG_04701
Phytophthora infestans
PITG_04701
N
0.346
Physo142181
Phytophthora sojae
Physo142181
N
0.346
maker-pir_contig_16-fgenesh-gene-0.1
Pythium irregulare
maker-pir_contig_16-fgenesh-gene-0.1
N
0.344
PYU1_G007494
Pythium ultimum
PYU1_G007494
N
0.339
ALNC14_004010
Albugo laibachii
ALNC14_004010
N
0.338
Phatr3_J33622
Phaeodactylum tricornutum
Phatr3_J33622
N
0.336
e_gw1.31.51.1
Fragilariopsis cylindrus
e_gw1.31.51.1
N
0.335
snap_masked-pag1_scaffold_539-abinit-gene-0.22
Pythium aphanidermatum
snap_masked-pag1_scaffold_539-abinit-gene-0.22
N
0.332
maker-piw_contig_1230-fgenesh-gene-0.2
Pythium iwayamai
maker-piw_contig_1230-fgenesh-gene-0.2
N
0.331
maker-pve_contig_1180-snap-gene-0.4
Pythium vexans
maker-pve_contig_1180-snap-gene-0.4
N
0.331
maker-pir_contig_314-fgenesh-gene-0.8
Pythium irregulare
maker-pir_contig_314-fgenesh-gene-0.8
N
0.331
PITG_08199
Phytophthora infestans
PITG_08199
N
0.330
F443_12676
Phytophthora parasitica
F443_12676
N
0.330
PYU1_G011054
Pythium ultimum
PYU1_G011054
N
0.328
HpaG812965
Hyaloperonospora arabidopsidis
HpaG812965
N
0.326
HpaG803356
Hyaloperonospora arabidopsidis
HpaG803356
N
0.326
maker-pag1_scaffold_1-fgenesh-gene-0.16
Pythium aphanidermatum
maker-pag1_scaffold_1-fgenesh-gene-0.16
N
0.325
Physo135389
Phytophthora sojae
Physo135389
N
0.325
maker-pve_contig_139-fgenesh-gene-0.10
Pythium vexans
maker-pve_contig_139-fgenesh-gene-0.10
N
0.325
PYU1_G014028
Pythium ultimum
PYU1_G014028
N
0.325
estExt_fgenesh1_kg.C_18600002
Phytophthora capsici
estExt_fgenesh1_kg.C_18600002
N
0.324
e_gw1.56.45.1
Fragilariopsis cylindrus
e_gw1.56.45.1
N
0.324
gw1.7.507.1
Phytophthora capsici
gw1.7.507.1
N
0.324
ALNC14_005160
Albugo laibachii
ALNC14_005160
N
0.321
Sb02g004370
Sorghum bicolor
Sb02g004370
I
0.319
SVE_0431600
Strongyloides venezuelensis
SVE_0431600
I
0.318