Thaps22454 (Thalassiosira pseudonana)
HSF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00447 (HSF_DNA-bind) IPR000232 Thaps22454 T242217_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HSF1
M00060_2.00 		Saccharomyces cerevisiae
NNNTTCNNN
NNNGAANNN		 PBM
Badis et al.(2008)
HSF1_4530 		0.329 0.416
HSF1
M07489_2.00 		Saccharomyces cerevisiae
HVTTCCAT
ATGGAABD		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0319.1 		0.329 0.416
HSF1
M08577_2.00 		Saccharomyces cerevisiae
TTCTAGAA
TTCTAGAA		 Misc
DeBoer et al.(2011)
YGL073W_1461 		0.329 0.416
HSF1
M08578_2.00 		Saccharomyces cerevisiae
GAANNNNNWRGAA
TTCYWNNNNNTTC		 Misc
DeBoer et al.(2011)
YGL073W_411 		0.329 0.416
HSF1
M08579_2.00 		Saccharomyces cerevisiae
HVTTCCAT
ATGGAABD		 Misc
DeBoer et al.(2011)
YGL073W_476 		0.329 0.416
HSF1
M08580_2.00 		Saccharomyces cerevisiae
RGAABNTTCTRGAA
TTCYAGAANVTTCY		 Misc
DeBoer et al.(2011)
YGL073W_615 		0.329 0.416
HSF1
M10874_2.00 		Saccharomyces cerevisiae
RGAANRGAANRGAAN
NTTCYNTTCYNTTCY		 Transfac
Matys et al.(2006)
F$HSF_02 		0.329 0.416
HSF1
M10875_2.00 		Saccharomyces cerevisiae
RGAANNTTCYNTTCY
RGAANRGAANNTTCY		 Transfac
Matys et al.(2006)
F$HSF_03 		0.329 0.416
HSF1
M10876_2.00 		Saccharomyces cerevisiae
RGAANNTTCYRGAAN
NTTCYRGAANNTTCY		 Transfac
Matys et al.(2006)
F$HSF_04 		0.329 0.416
HSF1
M10877_2.00 		Saccharomyces cerevisiae
NTTCYNTTCYRGAAN
NTTCYRGAANRGAAN		 Transfac
Matys et al.(2006)
F$HSF_05 		0.329 0.416
HSF1
M10878_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$HSF_Q6 		0.329 0.416
For this family, TFs with SR scores > 0.318 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Thaps22454 HSF 111 206

Links

Other HSF family TFs
Other Thalassiosira pseudonana TFs

60 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Phatr3_J49596 Phaeodactylum tricornutum Phatr3_J49596 N 0.440
Phatr3_Jdraft1650 Phaeodactylum tricornutum Phatr3_Jdraft1650 N 0.438
Phatr3_J49557 Phaeodactylum tricornutum Phatr3_J49557 N 0.417
estExt_Genewise1Plus.C_91152 Fragilariopsis cylindrus estExt_Genewise1Plus.C_91152 I 0.414
Phatr3_J44684 Phaeodactylum tricornutum Phatr3_J44684 N 0.411
Phatr3_EG00322 Phaeodactylum tricornutum Phatr3_EG00322 N 0.405
Phatr3_J48558 Phaeodactylum tricornutum Phatr3_J48558 N 0.403
estExt_fgenesh2_pg.C_40667 Fragilariopsis cylindrus estExt_fgenesh2_pg.C_40667 N 0.399
Phatr3_J49567 Phaeodactylum tricornutum Phatr3_J49567 N 0.394
Phatr3_J49594 Phaeodactylum tricornutum Phatr3_J49594 I 0.393
Phatr3_EG00672 Phaeodactylum tricornutum Phatr3_EG00672 N 0.392
Phatr3_J49620 Phaeodactylum tricornutum Phatr3_J49620 N 0.391
gw1.26.222.1 Fragilariopsis cylindrus gw1.26.222.1 N 0.390
Phatr3_EG01933 Phaeodactylum tricornutum Phatr3_EG01933 N 0.384
Phatr3_J49566 Phaeodactylum tricornutum Phatr3_J49566 N 0.384
Phatr3_J48394 Phaeodactylum tricornutum Phatr3_J48394 N 0.384
Phatr3_J48361 Phaeodactylum tricornutum Phatr3_J48361 N 0.383
Thaps10613 Thalassiosira pseudonana Thaps10613 N 0.375
Phatr3_J48702 Phaeodactylum tricornutum Phatr3_J48702 N 0.372
Thaps6958 Thalassiosira pseudonana Thaps6958 N 0.370
e_gw1.2.349.1 Fragilariopsis cylindrus e_gw1.2.349.1 N 0.368
Phatr3_EG00212 Phaeodactylum tricornutum Phatr3_EG00212 N 0.368
Phatr3_J39785 Phaeodactylum tricornutum Phatr3_J39785 N 0.363
Thaps23801 Thalassiosira pseudonana Thaps23801 N 0.363
gw1.2.1206.1 Fragilariopsis cylindrus gw1.2.1206.1 N 0.361
HSF2 Phaeodactylum tricornutum Phatr3_J55070 N 0.359
Phatr3_J48572 Phaeodactylum tricornutum Phatr3_J48572 N 0.357
HSF1 Phaeodactylum tricornutum Phatr3_J44099 N 0.357
Phatr3_J44917 Phaeodactylum tricornutum Phatr3_J44917 N 0.355
Phatr3_J48667 Phaeodactylum tricornutum Phatr3_J48667 N 0.350
Thaps21513 Thalassiosira pseudonana Thaps21513 N 0.349
SKUD_205711 Saccharomyces kudriavzevii SKUD_205711 I 0.347
gw1.27.181.1 Fragilariopsis cylindrus gw1.27.181.1 N 0.344
Phatr3_J43364 Phaeodactylum tricornutum Phatr3_J43364 N 0.342
Thaps22932 Thalassiosira pseudonana Thaps22932 N 0.339
Thaps12066 Thalassiosira pseudonana Thaps12066 N 0.337
Thaps264346 Thalassiosira pseudonana Thaps264346 I 0.336
Phatr3_J43363 Phaeodactylum tricornutum Phatr3_J43363 N 0.336
Phatr3_J49170 Phaeodactylum tricornutum Phatr3_J49170 N 0.335
Phatr3_J45392 Phaeodactylum tricornutum Phatr3_J45392 N 0.335
Thaps263978 Thalassiosira pseudonana Thaps263978 N 0.335
SU7_1143 Saccharomyces arboricola SU7_1143 I 0.332
TDEL_0E05170 Torulaspora delbrueckii TDEL_0E05170 I 0.331
ZBAI_09737 Zygosaccharomyces bailii ZBAI_09737 I 0.330
ZBAI_03930 Zygosaccharomyces bailii ZBAI_03930 I 0.330
8607_YGL073W Saccharomyces paradoxus 8607_YGL073W I 0.329
7859_YGL073W Saccharomyces mikatae 7859_YGL073W I 0.329
Phatr3_J34415 Phaeodactylum tricornutum Phatr3_J34415 I 0.329
HSF1 Saccharomyces cerevisiae YGL073W D 0.329
Phatr3_J39786 Phaeodactylum tricornutum Phatr3_J39786 N 0.328
estExt_Genewise1.C_11901 Fragilariopsis cylindrus estExt_Genewise1.C_11901 N 0.326
e_gw1.2.1757.1 Fragilariopsis cylindrus e_gw1.2.1757.1 N 0.326
e_gw1.94.63.1 Fragilariopsis cylindrus e_gw1.94.63.1 N 0.326
ZYRO0G08734g Zygosaccharomyces rouxii ZYRO0G08734g I 0.326
gw1.6.996.1 Fragilariopsis cylindrus gw1.6.996.1 N 0.325
e_gw1.27.180.1 Fragilariopsis cylindrus e_gw1.27.180.1 N 0.323
gw1.35.99.1 Fragilariopsis cylindrus gw1.35.99.1 N 0.321
gw1.1.2017.1 Fragilariopsis cylindrus gw1.1.2017.1 N 0.319
Thaps262668 Thalassiosira pseudonana Thaps262668 N 0.319
e_gw1.5.1185.1 Fragilariopsis cylindrus e_gw1.5.1185.1 N 0.319