Thaps264346 (Thalassiosira pseudonana)
HSF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00447 (HSF_DNA-bind) IPR000232 Thaps264346 T242246_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
HSF1
M00060_2.00
Saccharomyces cerevisiae
NNNTTCNNN

NNNGAANNN
PBM
Badis et al.(2008)
HSF1_4530
0.332 0.427
HSF1
M07489_2.00
Saccharomyces cerevisiae
HVTTCCAT

ATGGAABD
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0319.1
0.332 0.427
HSF1
M08577_2.00
Saccharomyces cerevisiae
TTCTAGAA

TTCTAGAA
Misc
DeBoer et al.(2011)
YGL073W_1461
0.332 0.427
HSF1
M08578_2.00
Saccharomyces cerevisiae
GAANNNNNWRGAA

TTCYWNNNNNTTC
Misc
DeBoer et al.(2011)
YGL073W_411
0.332 0.427
HSF1
M08579_2.00
Saccharomyces cerevisiae
HVTTCCAT

ATGGAABD
Misc
DeBoer et al.(2011)
YGL073W_476
0.332 0.427
HSF1
M08580_2.00
Saccharomyces cerevisiae
RGAABNTTCTRGAA

TTCYAGAANVTTCY
Misc
DeBoer et al.(2011)
YGL073W_615
0.332 0.427
HSF1
M10874_2.00
Saccharomyces cerevisiae
RGAANRGAANRGAAN

NTTCYNTTCYNTTCY
Transfac
Matys et al.(2006)
F$HSF_02
0.332 0.427
HSF1
M10875_2.00
Saccharomyces cerevisiae
RGAANNTTCYNTTCY

RGAANRGAANNTTCY
Transfac
Matys et al.(2006)
F$HSF_03
0.332 0.427
HSF1
M10876_2.00
Saccharomyces cerevisiae
RGAANNTTCYRGAAN

NTTCYRGAANNTTCY
Transfac
Matys et al.(2006)
F$HSF_04
0.332 0.427
HSF1
M10877_2.00
Saccharomyces cerevisiae
NTTCYNTTCYRGAAN

NTTCYRGAANRGAAN
Transfac
Matys et al.(2006)
F$HSF_05
0.332 0.427
HSF1
M10878_2.00
Saccharomyces cerevisiae Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$HSF_Q6
0.332 0.427
For this family, TFs with SR scores > 0.318 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Thaps264346 HSF 95 187

Links

Other HSF family TFs
Other Thalassiosira pseudonana TFs

44 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Thaps9607 Thalassiosira pseudonana Thaps9607 N 0.448
Thaps22570 Thalassiosira pseudonana Thaps22570 I 0.432
Thaps12066 Thalassiosira pseudonana Thaps12066 N 0.398
Thaps264590 Thalassiosira pseudonana Thaps264590 N 0.382
Thaps264072 Thalassiosira pseudonana Thaps264072 N 0.371
HSF1 Phaeodactylum tricornutum Phatr3_J44099 N 0.370
gw1.21.273.1 Fragilariopsis cylindrus gw1.21.273.1 N 0.368
Thaps11244 Thalassiosira pseudonana Thaps11244 N 0.363
Thaps25112 Thalassiosira pseudonana Thaps25112 N 0.361
Phatr3_J50481 Phaeodactylum tricornutum Phatr3_J50481 N 0.356
Thaps8215 Thalassiosira pseudonana Thaps8215 N 0.353
SKUD_205711 Saccharomyces kudriavzevii SKUD_205711 I 0.350
Thaps22135 Thalassiosira pseudonana Thaps22135 N 0.348
Thaps12116 Thalassiosira pseudonana Thaps12116 N 0.347
Thaps23803 Thalassiosira pseudonana Thaps23803 N 0.346
Phatr3_EG02327 Phaeodactylum tricornutum Phatr3_EG02327 N 0.345
Phatr3_J31764 Phaeodactylum tricornutum Phatr3_J31764 N 0.342
gw1.1.2017.1 Fragilariopsis cylindrus gw1.1.2017.1 N 0.338
ZYRO0G08734g Zygosaccharomyces rouxii ZYRO0G08734g I 0.337
e_gw1.7.780.1 Fragilariopsis cylindrus e_gw1.7.780.1 N 0.336
Thaps22454 Thalassiosira pseudonana Thaps22454 I 0.336
TDEL_0E05170 Torulaspora delbrueckii TDEL_0E05170 I 0.335
SU7_1143 Saccharomyces arboricola SU7_1143 I 0.334
Phatr3_J45206 Phaeodactylum tricornutum Phatr3_J45206 N 0.334
7859_YGL073W Saccharomyces mikatae 7859_YGL073W I 0.332
HSF1 Saccharomyces cerevisiae YGL073W D 0.332
8607_YGL073W Saccharomyces paradoxus 8607_YGL073W I 0.332
Phatr3_J49594 Phaeodactylum tricornutum Phatr3_J49594 I 0.331
Phatr3_Jdraft1650 Phaeodactylum tricornutum Phatr3_Jdraft1650 N 0.331
Phatr3_EG01965 Phaeodactylum tricornutum Phatr3_EG01965 N 0.330
CAOG_06646 Capsaspora owczarzaki CAOG_06646 I 0.329
Thaps264036 Thalassiosira pseudonana Thaps264036 N 0.328
Phatr3_J39785 Phaeodactylum tricornutum Phatr3_J39785 N 0.327
Thaps22414 Thalassiosira pseudonana Thaps22414 N 0.327
estExt_fgenesh2_pg.C_420088 Fragilariopsis cylindrus estExt_fgenesh2_pg.C_420088 I 0.326
KAFR_0C02250 Kazachstania africana KAFR_0C02250 I 0.325
Thapsdraft693 Thalassiosira pseudonana Thapsdraft693 N 0.325
Thaps261965 Thalassiosira pseudonana Thaps261965 N 0.325
ZBAI_03930 Zygosaccharomyces bailii ZBAI_03930 I 0.325
ZBAI_09737 Zygosaccharomyces bailii ZBAI_09737 I 0.325
Thaps11148 Thalassiosira pseudonana Thaps11148 N 0.324
7991_YGL073W Saccharomyces bayanus 7991_YGL073W I 0.324
CAGL0H03443g Candida glabrata CAGL0H03443g I 0.323
Thaps269233 Thalassiosira pseudonana Thaps269233 N 0.323