Gfo_R015011 (Geospiza fortis)
HSF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00447 (HSF_DNA-bind) IPR000232 Gfo_R015011 T242617_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HSFY2
M03326_2.00 		Homo sapiens
WTCGAWNVRWTCGAW
WTCGAWYBNWTCGAW		 SELEX
Jolma et al.(2013)
HSFY2_1 		0.381 0.526
HSFY2
M03327_2.00 		Homo sapiens
CRTTCGAWW
WWTCGAAYG		 SELEX
Jolma et al.(2013)
HSFY2_2 		0.381 0.526
HSFY2
M03328_2.00 		Homo sapiens
DTCGAAHSNWTCGAW
WTCGAWNSDTTCGAH		 SELEX
Jolma et al.(2013)
HSFY2_3 		0.381 0.526
HSFY1
M05515_2.00 		Homo sapiens
NDTVGAAYGWTTCGAAYGB
VCRTTCGAAWCRTTCBAHN		 SELEX
Yin et al.(2017)
HSFY1_eDBD_HT-SELEX_1 		0.381 0.526
HSFY1
M05516_2.00 		Homo sapiens
DTTCGAAHSDTTCGAAH
DTTCGAAHSDTTCGAAH		 SELEX
Yin et al.(2017)
HSFY1_eDBD_HT-SELEX_2 		0.381 0.526
HSFY2
M05511_2.00 		Homo sapiens
NDTVGAAYGWTTCGAAYGB
VCRTTCGAAWCRTTCBAHN		 SELEX
Yin et al.(2017)
HSFY2_eDBD_HT-SELEX_1 		0.381 0.526
HSFY2
M05512_2.00 		Homo sapiens
DTTCGAAHSDTTCGAAH
DTTCGAAHSDTTCGAAH		 SELEX
Yin et al.(2017)
HSFY2_eDBD_HT-SELEX_2 		0.381 0.526
HSFY1
M05517_2.00 		Homo sapiens
NDTRGAATGTTTRGAATGB
VCATTCYAAACATTCYAHN		 SELEX
Yin et al.(2017)
HSFY1_eDBD_Methyl-HT-SELEX_1 		0.381 0.526
HSFY1
M05518_2.00 		Homo sapiens
DTTCGAAHSDTTCGAAH
DTTCGAAHSDTTCGAAH		 SELEX
Yin et al.(2017)
HSFY1_eDBD_Methyl-HT-SELEX_2 		0.381 0.526
HSFY2
M05513_2.00 		Homo sapiens
NDWRGAAYGTTTRGAAYGB
VCRTTCYAAACRTTCYWHN		 SELEX
Yin et al.(2017)
HSFY2_eDBD_Methyl-HT-SELEX_1 		0.381 0.526
HSFY2
M05514_2.00 		Homo sapiens
DTTCGAAHSDTTCGAAH
DTTCGAAHSDTTCGAAH		 SELEX
Yin et al.(2017)
HSFY2_eDBD_Methyl-HT-SELEX_2 		0.381 0.526
For this family, TFs with SR scores > 0.318 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gfo_R015011 HSF 3 117

Links

Other HSF family TFs
Other Geospiza fortis TFs

49 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSFALG00000008921 Ficedula albicollis ENSFALG00000008921 I 0.622
Gfo_R015012 Geospiza fortis Gfo_R015012 I 0.561
ENSTGUG00000006066 Taeniopygia guttata ENSTGUG00000006066 I 0.543
ENSTGUG00000006065 Taeniopygia guttata ENSTGUG00000006065 I 0.543
Afo_R012751 Aptenodytes forsteri Afo_R012751 I 0.485
Aan_R010039 Calypte anna Aan_R010039 I 0.453
ENSMGAG00000013806 Meleagris gallopavo ENSMGAG00000013806 I 0.408
ENSGALG00000028720 Gallus gallus ENSGALG00000028720 I 0.395
ENSMLUG00000024907 Myotis lucifugus ENSMLUG00000024907 I 0.385
Hsfy2 Rattus norvegicus ENSRNOG00000038569 I 0.383
Hsfy2 Mus musculus ENSMUSG00000045336 I 0.383
HSFY1 Homo sapiens ENSG00000172468 D 0.381
HSFY2 Homo sapiens ENSG00000169953 D 0.381
ENSMGAG00000014469 Meleagris gallopavo ENSMGAG00000014469 I 0.381
ENSMLUG00000015387 Myotis lucifugus ENSMLUG00000015387 I 0.376
ENSMGAG00000013753 Meleagris gallopavo ENSMGAG00000013753 I 0.375
ENSECAG00000000093 Equus caballus ENSECAG00000000093 I 0.373
ENSBTAG00000046306 Bos taurus ENSBTAG00000046306 I 0.371
Cmyd_10018130 Chelonia mydas Cmyd_10018130 I 0.369
Tal_R003042 Tyto alba Tal_R003042 I 0.364
ENSBTAG00000045938 Bos taurus ENSBTAG00000045938 I 0.364
ENSMGAG00000014467 Meleagris gallopavo ENSMGAG00000014467 I 0.360
ENSOANG00000012192 Ornithorhynchus anatinus ENSOANG00000012192 I 0.355
ENSGALG00000019262 Gallus gallus ENSGALG00000019262 I 0.350
ENSMGAG00000014478 Meleagris gallopavo ENSMGAG00000014478 N 0.350
ENSVPAG00000010189 Vicugna pacos ENSVPAG00000010189 I 0.350
Pvit_14501 Pogona vitticeps Pvit_14501 I 0.347
Tal_R002418 Tyto alba Tal_R002418 I 0.346
ENSOANG00000028803 Ornithorhynchus anatinus ENSOANG00000028803 I 0.346
ENSBTAG00000047168 Bos taurus ENSBTAG00000047168 I 0.346
ENSOANG00000001091 Ornithorhynchus anatinus ENSOANG00000001091 I 0.346
Ogr08578 Ophisaurus gracilis Ogr08578 I 0.345
ENSVPAG00000003263 Vicugna pacos ENSVPAG00000003263 I 0.342
ENSACAG00000008631 Anolis carolinensis ENSACAG00000008631 I 0.339
ENSMLUG00000028032 Myotis lucifugus ENSMLUG00000028032 I 0.338
ENSAMEG00000014907 Ailuropoda melanoleuca ENSAMEG00000014907 I 0.335
ENSAPLG00000009652 Anas platyrhynchos ENSAPLG00000009652 I 0.334
ENSMLUG00000026997 Myotis lucifugus ENSMLUG00000026997 N 0.330
ENSVPAG00000004671 Vicugna pacos ENSVPAG00000004671 I 0.330
ENSCSAG00000018308 Chlorocebus sabaeus ENSCSAG00000018308 I 0.330
ENSMGAG00000003672 Meleagris gallopavo ENSMGAG00000003672 I 0.328
DICVIV_13476 Dictyocaulus viviparus DICVIV_13476 I 0.326
ENSMLUG00000022730 Myotis lucifugus ENSMLUG00000022730 I 0.326
ENSMODG00000028107 Monodelphis domestica ENSMODG00000028107 I 0.326
ENSOGAG00000026441 Otolemur garnettii ENSOGAG00000026441 I 0.322
ENSLACG00000012431 Latimeria chalumnae ENSLACG00000012431 I 0.321
ENSSSCG00000012734 Sus scrofa ENSSSCG00000012734 I 0.320
ENSMEUG00000003908 Macropus eugenii ENSMEUG00000003908 I 0.319
ENSCJAG00000032803 Callithrix jacchus ENSCJAG00000032803 I 0.319